|
KO |
Eukaryotic type
|
|
|
Prokaryotic type
|
SSBR (single strand breaks repair)
|
DSBR (double strand breaks repair)
|
HR (homologous recombination)
|
RecBC pathway proteins
|
C248_1661 hypothetical protein
C248_1318 recA; recombinase A
C248_1685 ruvA; Holliday junction DNA helicase RuvA
C248_1684 ruvB; Holliday junction DNA helicase
C248_1242 priA; primosomal protein n'
C248_1382 putative exonuclease
C248_1381 putative exonuclease
|
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
|
RecFOR pathway proteins
|
C248_1318 recA; recombinase A
C248_0598 radA; putative DNA repair protein
C248_0004 recF; DNA replication and repair protein RecF
C248_1257 recG; ATP-dependent DNA helicase
C248_1679 putative single-stranded-DNA-specific exonuclease
C248_1609 putative recombination protein O
C248_0531 recR; putative recombination protein
C248_1562 putative DNA repair protein
C248_1489 recU; putative recombination protein U
C248_1685 ruvA; Holliday junction DNA helicase RuvA
C248_1684 ruvB; Holliday junction DNA helicase
|
K03553 recA; recombination protein RecA
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
|
AddAB pathway proteins
|
Other HR factor
|
Archaeal homologous recombinant proteins
|
NHEJ (non-homologous end-joining)
|
TLS (translesion DNA synthesis) factors
|
Other factors with a suspected DNA repair function
|