KEGG Orthology (KO) - Shewanella baltica OS223

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
     00190 Oxidative phosphorylation [PATH:sbp00190]
     00195 Photosynthesis
     00196 Photosynthesis - antenna proteins
     00710 Carbon fixation in photosynthetic organisms
     00720 Carbon fixation pathways in prokaryotes
     00680 Methane metabolism [PATH:sbp00680]
     00910 Nitrogen metabolism [PATH:sbp00910]
     00920 Sulfur metabolism [PATH:sbp00920]
       Sbal223_3292 sulfate ABC transporter, periplasmic sulfate-binding protein
       Sbal223_3293 sulfate ABC transporter, inner membrane subunit CysT
       Sbal223_3294 sulfate ABC transporter, inner membrane subunit CysW
       Sbal223_3295 sulfate ABC transporter, ATPase subunit
       Sbal223_0955 sulfate adenylyltransferase, large subunit
       Sbal223_0954 sulfate adenylyltransferase, small subunit
       Sbal223_0957 Adenylyl-sulfate kinase
       Sbal223_2878 3'(2'),5'-bisphosphate nucleotidase
       Sbal223_4086 3'(2'),5'-bisphosphate nucleotidase
       Sbal223_0946 phosphoadenosine phosphosulfate reductase
       Sbal223_0944 sulfite reductase (NADPH) flavoprotein, alpha chain
       Sbal223_0945 sulfite reductase (NADPH) hemoprotein, beta-component
       Sbal223_3679 molydopterin dinucleotide-binding region
       Sbal223_3677 4Fe-4S ferredoxin iron-sulfur binding domain protein
       Sbal223_3678 Polysulphide reductase NrfD
       Sbal223_0559 molybdopterin oxidoreductase
       Sbal223_3198 Rhodanese domain protein
       Sbal223_4287 Rhodanese domain protein
       Sbal223_1959 serine O-acetyltransferase
       Sbal223_2267 Pyridoxal-5'-phosphate-dependent protein beta subunit
       Sbal223_1699 cysteine synthase A
       Sbal223_2858 Homoserine O-succinyltransferase
       Sbal223_0564 O-succinylhomoserine (thiol)-lyase
       Sbal223_2566 acyl-CoA dehydrogenase domain protein
       Sbal223_2073 acyl-CoA dehydrogenase domain protein
K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
K02046 cysU; sulfate/thiosulfate transport system permease protein
K02047 cysW; sulfate/thiosulfate transport system permease protein
K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
K08357 ttrA; tetrathionate reductase subunit A
K08358 ttrB; tetrathionate reductase subunit B
K08359 ttrC; tetrathionate reductase subunit C
K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:sbp03000]
     03021 Transcription machinery [BR:sbp03021]
     03019 Messenger RNA biogenesis [BR:sbp03019]
     03041 Spliceosome
     03011 Ribosome [BR:sbp03011]
     03009 Ribosome biogenesis [BR:sbp03009]
     03016 Transfer RNA biogenesis [BR:sbp03016]
       Sbal223_4104 ribonuclease T2
       Sbal223_3158 polynucleotide adenylyltransferase/metal dependent phosphohydrolase
       Sbal223_1554 glutamyl-tRNA synthetase
       Sbal223_1503 prolyl-tRNA synthetase
       Sbal223_3235 isoleucyl-tRNA synthetase
       Sbal223_1098 leucyl-tRNA synthetase
       Sbal223_1886 methionyl-tRNA synthetase
       Sbal223_2758 glutaminyl-tRNA synthetase
       Sbal223_0498 arginyl-tRNA synthetase
       Sbal223_3419 lysyl-tRNA synthetase
       Sbal223_2040 aspartyl-tRNA synthetase
       Sbal223_1250 alanyl-tRNA synthetase
       Sbal223_2379 asparaginyl-tRNA synthetase
       Sbal223_3616 tRNA synthetase class II (G H P and S)
       Sbal223_2184 threonyl-tRNA synthetase
       Sbal223_2195 seryl-tRNA synthetase
       Sbal223_2753 cysteinyl-tRNA synthetase
       Sbal223_1255 valyl-tRNA synthetase
       Sbal223_1374 histidyl-tRNA synthetase
       Sbal223_2419 phenylalanyl-tRNA synthetase, alpha subunit
       Sbal223_2418 phenylalanyl-tRNA synthetase, beta subunit
       Sbal223_3143 tyrosyl-tRNA synthetase
       Sbal223_3995 tryptophanyl-tRNA synthetase
       Sbal223_0323 D-tyrosyl-tRNA(Tyr) deacylase
       Sbal223_2488 histidine triad (HIT) protein
       Sbal223_1326 tRNA (guanine-N(7)-)-methyltransferase
       Sbal223_1505 protein of unknown function UPF0066
       Sbal223_1617 tRNA pseudouridine synthase A
       Sbal223_1130 tRNA pseudouridine synthase B
       Sbal223_1241 tRNA pseudouridine synthase D TruD
       Sbal223_1961 cysteine desulfurase IscS
       Sbal223_0036 Sua5/YciO/YrdC/YwlC family protein
       Sbal223_3711 tRNA delta(2)-isopentenylpyrophosphate transferase
       Sbal223_4324 tRNA modification GTPase TrmE
       Sbal223_4321 glucose inhibited division protein A
       Sbal223_4080 selenide, water dikinase
       Sbal223_2878 3'(2'),5'-bisphosphate nucleotidase
       Sbal223_4086 3'(2'),5'-bisphosphate nucleotidase
       Sbal223_4327 ribonuclease P protein component
       Sbal223_R0025 rnpB; RNA component of RNaseP
       Sbal223_2545 ribonuclease T
       Sbal223_0395 ribonuclease PH
       Sbal223_2427 ribonuclease D
       Sbal223_3688 2'-5' RNA ligase
       Sbal223_1208 ABC transporter related
       Sbal223_0013 glycyl-tRNA synthetase, alpha subunit
       Sbal223_0012 glycyl-tRNA synthetase, beta subunit
       Sbal223_0871 Glutamate--tRNA ligase
       Sbal223_1040 ybaK/ebsC protein
       Sbal223_1381 CMP/dCMP deaminase zinc-binding
       Sbal223_0799 TIM-barrel protein, yjbN family
       Sbal223_3887 TIM-barrel protein, nifR3 family
       Sbal223_1762 dihydrouridine synthase DuS
       Sbal223_1106 tRNA-i(6)A37 thiotransferase enzyme MiaB
       Sbal223_2038 methyltransferase
       Sbal223_2037 methyltransferase
       Sbal223_3751 Methyltransferase type 11
       Sbal223_4076 tRNA (uracil-5-)-methyltransferase
       Sbal223_3101 tRNA (guanine-N1)-methyltransferase
       Sbal223_1958 RNA methyltransferase, TrmH family, group 1
       Sbal223_2018 conserved hypothetical protein
       Sbal223_0213 RNA methyltransferase, TrmH family, group 2
       Sbal223_3451 methyltransferase type 12
       Sbal223_1812 protein of unknown function DUF358
       Sbal223_2911 pseudouridine synthase
       Sbal223_3515 pseudouridine synthase
       Sbal223_3301 pseudouridine synthase
       Sbal223_1053 pseudouridine synthase
       Sbal223_1566 pseudouridine synthase
       Sbal223_0300 pseudouridine synthase Rlu family protein, TIGR01621
       Sbal223_0459 pseudouridine synthase
       Sbal223_1873 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
       Sbal223_2224 PP-loop domain protein
       Sbal223_0017 SirA family protein
       Sbal223_2494 SirA family protein
       Sbal223_2198 sulfur relay protein TusB/DsrH
       Sbal223_2199 sulfur relay protein TusC/DsrF
       Sbal223_2200 sulfur relay protein TusD/DsrE
       Sbal223_2197 sulfur relay protein, TusE/DsrC/DsvC family
       Sbal223_1963 iron-sulfur cluster assembly protein IscA
       Sbal223_0860 folate-binding protein YgfZ
       Sbal223_2756 tRNA-hydroxylase
       Sbal223_1612 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
       Sbal223_1569 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
       Sbal223_2269 exsB protein
       Sbal223_2268 radical activating enzyme
       Sbal223_2923 7-cyano-7-deazaguanine reductase
       Sbal223_3571 iron-sulfur cluster binding protein
       Sbal223_4081 tRNA 2-selenouridine synthase
       Sbal223_1570 queuine tRNA-ribosyltransferase
       Sbal223_2998 thiamine biosynthesis/tRNA modification protein ThiI
       Sbal223_2886 tRNA(Ile)-lysidine synthetase
       Sbal223_2433 peptidase M22 glycoprotease
       Sbal223_3165 metalloendopeptidase, glycoprotease family
       Sbal223_3714 protein of unknown function UPF0079
       Sbal223_0816 UBA/THIF-type NAD/FAD binding protein
       Sbal223_0728 ribonuclease R
       Sbal223_1133 Polyribonucleotide nucleotidyltransferase
K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K01978 rnpB; M1 RNA
K03683 rnt; ribonuclease T [EC:3.1.13.-]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
K06020 ettA; energy-dependent translational throttle protein EttA
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K07237 tusB; tRNA 2-thiouridine synthesizing protein B
K07236 tusC; tRNA 2-thiouridine synthesizing protein C
K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
     03012 Translation factors [BR:sbp03012]
     03110 Chaperones and folding catalysts [BR:sbp03110]
     04131 Membrane trafficking [BR:sbp04131]
     04121 Ubiquitin system [BR:sbp04121]
     03051 Proteasome [BR:sbp03051]
     03032 DNA replication proteins [BR:sbp03032]
     03036 Chromosome and associated proteins [BR:sbp03036]
     03400 DNA repair and recombination proteins [BR:sbp03400]
     03029 Mitochondrial biogenesis [BR:sbp03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 24, 2024