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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:sdt03030]
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03410 Base excision repair [PATH:sdt03410]
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03420 Nucleotide excision repair [PATH:sdt03420]
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03430 Mismatch repair [PATH:sdt03430]
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03440 Homologous recombination [PATH:sdt03440]
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 SPSE_1156 recJ; single-strand DNA-specific exonuclease RecJ
SPSE_0730 single-stranded DNA-binding protein family
SPSE_2467 ssb; single-stranded DNA-binding protein
SPSE_0005 DNA replication and repair protein RecF
SPSE_1223 recO; DNA repair protein RecO
SPSE_2335 recR; recombination protein RecR
SPSE_1493 recA; protein RecA
SPSE_1110 polA; DNA polymerase I
SPSE_1150 ruvA; Holliday junction DNA helicase RuvA
SPSE_1151 ruvB; Holliday junction DNA helicase RuvB
SPSE_1573 recG; ATP-dependent DNA helicase RecG
SPSE_0608 transcription regulator, putative
SPSE_1173 helicase, RecD/TraA family
SPSE_1099 dnaE; DNA polymerase III subunit alpha
SPSE_1516 polC; DNA polymerase III, alpha subunit, Gram-positive type
SPSE_0002 dnaN; DNA polymerase III, beta subunit
SPSE_2337 dnaX; DNA polymerase III, subunits gamma and tau
SPSE_1202 holA; DNA polymerase III, delta subunit
SPSE_2327 DNA polymerase III delta prime subunit
SPSE_0858 conserved hypothetical protein
SPSE_1589 priA; primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:sdt03000]
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03021 Transcription machinery [BR:sdt03021]
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03019 Messenger RNA biogenesis [BR:sdt03019]
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03041 Spliceosome
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03011 Ribosome [BR:sdt03011]
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03009 Ribosome biogenesis [BR:sdt03009]
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03016 Transfer RNA biogenesis [BR:sdt03016]
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03012 Translation factors [BR:sdt03012]
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03110 Chaperones and folding catalysts [BR:sdt03110]
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04131 Membrane trafficking [BR:sdt04131]
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04121 Ubiquitin system [BR:sdt04121]
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03051 Proteasome
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03032 DNA replication proteins [BR:sdt03032]
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03036 Chromosome and associated proteins [BR:sdt03036]
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03400 DNA repair and recombination proteins [BR:sdt03400]
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SPSE_0804 methylated-DNA--protein-cysteine methyltransferase
SPSE_0048 deoxyribodipyrimidine photolyase, putative
SPSE_2193 ung; uracil-DNA glycosylase
SPSE_0475 3-methyladenine DNA glycosylase, putative
SPSE_0887 mutY; A/G-specific adenine glycosylase
SPSE_1341 nth; endonuclease III
SPSE_0234 MutT/nudix family protein
SPSE_1004 nucleoside triphosphatase YtkD, putative
SPSE_1138 DNA-3-methyladenine glycosylase I
SPSE_1111 mutM; formamidopyrimidine-DNA glycosylase
SPSE_1233 nfo; endonuclease IV
SPSE_1156 recJ; single-strand DNA-specific exonuclease RecJ
SPSE_0838 ligA; DNA ligase, NAD-dependent
SPSE_1110 polA; DNA polymerase I
SPSE_1979 uvrA; excinuclease ABC subunit A
SPSE_1980 uvrB; excinuclease ABC subunit B
SPSE_1651 uvrC; excinuclease ABC subunit C
SPSE_0837 pcrA; ATP-dependent DNA helicase PcrA
SPSE_1740 hypothetical protein
SPSE_2417 conserved hypothetical protein
SPSE_2243 rpoB; DNA-directed RNA polymerase, beta subunit
SPSE_2242 rpoC; DNA-directed RNA polymerase, beta' subunit
SPSE_0598 rpoA; DNA-directed RNA polymerase, alpha subunit
SPSE_0695 rpoE; DNA-directed RNA polymerase, delta subunit
SPSE_1591 rpoZ; DNA-directed RNA polymerase, omega subunit
SPSE_2308 mfd; transcription-repair coupling factor
SPSE_1479 mutS; DNA mismatch repair protein MutS
SPSE_1653 recombination and DNA strand exchange inhibitor protein
SPSE_1478 mutL; DNA mismatch repair protein MutL
SPSE_1274 xseA; exodeoxyribonuclease VII, large subunit
SPSE_1275 xseB; exodeoxyribonuclease VII, small subunit
SPSE_1099 dnaE; DNA polymerase III subunit alpha
SPSE_1516 polC; DNA polymerase III, alpha subunit, Gram-positive type
SPSE_0002 dnaN; DNA polymerase III, beta subunit
SPSE_1202 holA; DNA polymerase III, delta subunit
SPSE_2327 DNA polymerase III delta prime subunit
SPSE_0858 conserved hypothetical protein
SPSE_2337 dnaX; DNA polymerase III, subunits gamma and tau
SPSE_0730 single-stranded DNA-binding protein family
SPSE_2467 ssb; single-stranded DNA-binding protein
SPSE_1173 helicase, RecD/TraA family
SPSE_1493 recA; protein RecA
SPSE_1150 ruvA; Holliday junction DNA helicase RuvA
SPSE_1151 ruvB; Holliday junction DNA helicase RuvB
SPSE_1589 priA; primosomal protein N'
SPSE_1425 sbcC; exonuclease SbcC
SPSE_1426 sbcD; exonuclease SbcD
SPSE_2263 radA; DNA repair protein RadA
SPSE_0005 DNA replication and repair protein RecF
SPSE_1573 recG; ATP-dependent DNA helicase RecG
SPSE_0608 transcription regulator, putative
SPSE_1223 recO; DNA repair protein RecO
SPSE_2335 recR; recombination protein RecR
SPSE_1279 recN; DNA repair protein RecN
SPSE_1344 recU; recombination protein U
SPSE_1869 rexA; exonuclease RexA
SPSE_1870 rexB; exonuclease RexB
SPSE_0623 cas1; CRISPR-associated protein Cas1
SPSE_0007 gyrA; DNA gyrase, A subunit
SPSE_0006 gyrB; DNA gyrase, B subunit
SPSE_1532 topA; DNA topoisomerase I
SPSE_1322 hup; DNA-binding protein HU
SPSE_1314 recQ1; ATP-dependent DNA helicase RecQ
SPSE_2022 recQ2; ATP-dependent DNA helicase RecQ
SPSE_0857 dinB; DNA-directed DNA polymerase IV
SPSE_1406 DNA-damage repair protein, putative
SPSE_1433 lexA; SOS regulatory protein LexA
SPSE_0882 recX; regulatory protein RecX
SPSE_1654 DNA-dependent DNA polymerase beta chain
SPSE_1338 DnaQ family exonuclease/DinG family helicase, putative
SPSE_2002 nrdE; ribonucleoside-diphosphate reductase, alpha subunit
SPSE_2001 nrdF; ribonucleoside-diphosphate reductase, beta subunit
SPSE_1098 DHH subfamily phosphodiesterase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:sdt03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Staphylococcus pseudintermedius ED99