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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:see03030]
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 SNSL254_A2035 conserved domain protein
SNSL254_A0289 dnaQ; DNA polymerase III, epsilon subunit
SNSL254_p_0181 putative exonuclease
SNSL254_A0253 dnaE; DNA polymerase III, alpha subunit
SNSL254_A0534 dnaX; DNA polymerase III, tau subunit
SNSL254_A1300 DNA polymerase III subunit delta'
SNSL254_A0703 holA; DNA polymerase III, delta subunit
SNSL254_A4913 holD; DNA polymerase III, psi subunit
SNSL254_A4825 holC; DNA polymerase III, chi subunit
SNSL254_A4122 dnaN; DNA polymerase III, beta subunit
SNSL254_A1140 replicative DNA helicase
SNSL254_A4589 dnaB; replicative DNA helicase
SNSL254_A3470 dnaG; DNA primase
SNSL254_A4599 ssb2; single-stranded DNA-binding protein
SNSL254_p_0108 ssb; single-strand DNA-binding protein
SNSL254_A0288 rnhA; ribonuclease HI
SNSL254_A0252 rnhB; ribonuclease HII
SNSL254_A4281 DNA polymerase I
SNSL254_A2620 ligA; DNA ligase
SNSL254_A4019 ligA; NAD-dependent DNA ligase
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K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:see03410]
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03420 Nucleotide excision repair [PATH:see03420]
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03430 Mismatch repair [PATH:see03430]
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SNSL254_A3114 mutS; DNA mismatch repair protein MutS
SNSL254_A4720 DNA mismatch repair protein MutL
SNSL254_A3233 mutH; DNA mismatch repair endonuclease MutH
SNSL254_A4231 uvrD; DNA helicase II
SNSL254_A2244 exodeoxyribonuclease I
SNSL254_A2705 xseA; exodeoxyribonuclease VII, large subunit
SNSL254_A0471 xseB; exodeoxyribonuclease VII, small subunit
SNSL254_A2037 exodeoxyribonuclease 10
SNSL254_A3276 recJ; single-stranded-DNA-specific exonuclease RecJ
SNSL254_A4599 ssb2; single-stranded DNA-binding protein
SNSL254_p_0108 ssb; single-strand DNA-binding protein
SNSL254_A0253 dnaE; DNA polymerase III, alpha subunit
SNSL254_A4122 dnaN; DNA polymerase III, beta subunit
SNSL254_A0534 dnaX; DNA polymerase III, tau subunit
SNSL254_A0703 holA; DNA polymerase III, delta subunit
SNSL254_A1300 DNA polymerase III subunit delta'
SNSL254_A0289 dnaQ; DNA polymerase III, epsilon subunit
SNSL254_p_0181 putative exonuclease
SNSL254_A2035 conserved domain protein
SNSL254_A4825 holC; DNA polymerase III, chi subunit
SNSL254_A4913 holD; DNA polymerase III, psi subunit
SNSL254_A2620 ligA; DNA ligase
SNSL254_A4019 ligA; NAD-dependent DNA ligase
SNSL254_A2942 retron EC67 DNA adenine methylase
SNSL254_A3756 dam; DNA adenine methylase
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K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
|
03440 Homologous recombination [PATH:see03440]
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SNSL254_A3276 recJ; single-stranded-DNA-specific exonuclease RecJ
SNSL254_A4599 ssb2; single-stranded DNA-binding protein
SNSL254_p_0108 ssb; single-strand DNA-binding protein
SNSL254_A4121 DNA replication and repair protein RecF
SNSL254_A2782 recO; DNA repair protein RecO
SNSL254_A0537 recR; recombination protein RecR
SNSL254_A3031 recA; protein RecA
SNSL254_A4281 DNA polymerase I
SNSL254_A2054 ruvA; Holliday junction DNA helicase RuvA
SNSL254_A2053 ruvB; holliday junction DNA helicase RuvB
SNSL254_A2057 ruvC; crossover junction endodeoxyribonuclease RuvC
SNSL254_A4024 recG; ATP-dependent DNA helicase RecG
SNSL254_A3220 recB; exodeoxyribonuclease V, beta subunit
SNSL254_A3222 recC; exodeoxyribonuclease V, gamma subunit
SNSL254_A3219 recD; exodeoxyribonuclease V, alpha subunit
SNSL254_A0253 dnaE; DNA polymerase III, alpha subunit
SNSL254_A4122 dnaN; DNA polymerase III, beta subunit
SNSL254_A0534 dnaX; DNA polymerase III, tau subunit
SNSL254_A0703 holA; DNA polymerase III, delta subunit
SNSL254_A1300 DNA polymerase III subunit delta'
SNSL254_A0289 dnaQ; DNA polymerase III, epsilon subunit
SNSL254_p_0181 putative exonuclease
SNSL254_A2035 conserved domain protein
SNSL254_A4825 holC; DNA polymerase III, chi subunit
SNSL254_A4913 holD; DNA polymerase III, psi subunit
SNSL254_A4425 primosomal protein N'
SNSL254_A4752 priB; primosomal replication protein N
SNSL254_A0531 primosomal replication protein N''
SNSL254_A4899 primosomal protein 1
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
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03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
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09126 Chromosome
|
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09125 Information processing in viruses
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09130 Environmental Information Processing
|
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09140 Cellular Processes
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09150 Organismal Systems
|
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09160 Human Diseases
|
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09180 Brite Hierarchies
|
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:see03000]
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03021 Transcription machinery [BR:see03021]
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03019 Messenger RNA biogenesis [BR:see03019]
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03041 Spliceosome
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03011 Ribosome [BR:see03011]
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03009 Ribosome biogenesis [BR:see03009]
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03016 Transfer RNA biogenesis [BR:see03016]
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03012 Translation factors [BR:see03012]
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03110 Chaperones and folding catalysts [BR:see03110]
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04131 Membrane trafficking [BR:see04131]
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04121 Ubiquitin system [BR:see04121]
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03051 Proteasome [BR:see03051]
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03032 DNA replication proteins [BR:see03032]
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SNSL254_A0288 rnhA; ribonuclease HI
SNSL254_A2155 modification methylase EcoRII
SNSL254_p_0125 C-5 cytosine-specific DNA methylase
SNSL254_p_0058 C-5 cytosine-specific DNA methylase family protein
SNSL254_A4503 hupA; DNA-binding protein HU-alpha
SNSL254_A0500 hupB; DNA-binding protein HU-beta
SNSL254_p_0022 hup; DNA-binding protein HU
SNSL254_A1450 ihfA; integration host factor, alpha subunit
SNSL254_A1015 ihfB; integration host factor, beta subunit
SNSL254_A4123 dnaA; chromosomal replication initiator protein DnaA
SNSL254_A1140 replicative DNA helicase
SNSL254_A4589 dnaB; replicative DNA helicase
SNSL254_A4898 DNA replication protein DnaC
SNSL254_A3470 dnaG; DNA primase
SNSL254_A4599 ssb2; single-stranded DNA-binding protein
SNSL254_p_0108 ssb; single-strand DNA-binding protein
SNSL254_A0253 dnaE; DNA polymerase III, alpha subunit
SNSL254_A4122 dnaN; DNA polymerase III, beta subunit
SNSL254_A4825 holC; DNA polymerase III, chi subunit
SNSL254_A0703 holA; DNA polymerase III, delta subunit
SNSL254_A1300 DNA polymerase III subunit delta'
SNSL254_A0289 dnaQ; DNA polymerase III, epsilon subunit
SNSL254_p_0181 putative exonuclease
SNSL254_A0534 dnaX; DNA polymerase III, tau subunit
SNSL254_A4913 holD; DNA polymerase III, psi subunit
SNSL254_A2035 conserved domain protein
SNSL254_A0252 rnhB; ribonuclease HII
SNSL254_A4281 DNA polymerase I
SNSL254_A2620 ligA; DNA ligase
SNSL254_A4019 ligA; NAD-dependent DNA ligase
SNSL254_A1579 tus; DNA replication terminus site-binding protein
SNSL254_p_0183 DNA replication terminus site-binding protein
SNSL254_A2942 retron EC67 DNA adenine methylase
SNSL254_A3756 dam; DNA adenine methylase
SNSL254_A0757 seqA; protein SeqA
SNSL254_A2691 hda; DnaA regulatory inactivator Hda
SNSL254_A2457 gyrA; DNA gyrase, A subunit
SNSL254_A4120 gyrB; DNA gyrase, B subunit
SNSL254_A3430 parC; DNA topoisomerase IV, A subunit
SNSL254_A3439 parE; DNA topoisomerase IV, B subunit
SNSL254_A1841 topA; DNA topoisomerase I
SNSL254_A1409 topB; DNA topoisomerase III
SNSL254_p_0063 topB; DNA topoisomerase III
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02315 dnaC; DNA replication protein DnaC
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10748 tus; DNA replication terminus site-binding protein
K10748 tus; DNA replication terminus site-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03645 seqA; negative modulator of initiation of replication
K10763 hda; DnaA-homolog protein
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:see03036]
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03400 DNA repair and recombination proteins [BR:see03400]
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SNSL254_A1782 methylated-dna--protein-cysteine methyltransferase
SNSL254_A0769 deoxyribodipyrimidine photo-lyase
SNSL254_A2859 ung; uracil-DNA glycosylase
SNSL254_A3358 mutY; A/G-specific adenine glycosylase
SNSL254_A1563 nth; endonuclease III
SNSL254_A0149 mutator MutT protein
SNSL254_A4011 dut; dUTP diphosphatase
SNSL254_A2449 regulatory protein ada
SNSL254_A2448 alpha-ketoglutarate-dependent dioxygenase AlkB
SNSL254_A3472 G/U mismatch-specific DNA glycosylase
SNSL254_A2308 dna-3-methyladenine glycosylase 2
SNSL254_A3921 dna-3-methyladenine glycosylase 1
SNSL254_A4006 mutM; formamidopyrimidine-DNA glycosylase
SNSL254_A0788 endonuclease VIII
SNSL254_A1413 xth; exodeoxyribonuclease III
SNSL254_A2395 endonuclease 4
SNSL254_A4501 nfi; endonuclease V
SNSL254_A3276 recJ; single-stranded-DNA-specific exonuclease RecJ
SNSL254_A2620 ligA; DNA ligase
SNSL254_A4019 ligA; NAD-dependent DNA ligase
SNSL254_A4281 DNA polymerase I
SNSL254_A4598 uvrA; excinuclease ABC, A subunit
SNSL254_A0862 uvrB; excinuclease ABC, B subunit
SNSL254_A2109 uvrC; excinuclease ABC, C subunit
SNSL254_A1422 excinuclease cho
SNSL254_A4231 uvrD; DNA helicase II
SNSL254_A4486 rpoB; DNA-directed RNA polymerase, beta subunit
SNSL254_A4487 rpoC; DNA-directed RNA polymerase, beta' subunit
SNSL254_A3683 rpoA; DNA-directed RNA polymerase, alpha subunit
SNSL254_A4021 rpoZ; DNA-directed RNA polymerase, omega subunit
SNSL254_A1315 mfd; transcription-repair coupling factor
SNSL254_A3114 mutS; DNA mismatch repair protein MutS
SNSL254_A4720 DNA mismatch repair protein MutL
SNSL254_A3233 mutH; DNA mismatch repair endonuclease MutH
SNSL254_A2244 exodeoxyribonuclease I
SNSL254_A2705 xseA; exodeoxyribonuclease VII, large subunit
SNSL254_A0471 xseB; exodeoxyribonuclease VII, small subunit
SNSL254_A2037 exodeoxyribonuclease 10
SNSL254_A0253 dnaE; DNA polymerase III, alpha subunit
SNSL254_A4122 dnaN; DNA polymerase III, beta subunit
SNSL254_A4825 holC; DNA polymerase III, chi subunit
SNSL254_A0703 holA; DNA polymerase III, delta subunit
SNSL254_A1300 DNA polymerase III subunit delta'
SNSL254_A0289 dnaQ; DNA polymerase III, epsilon subunit
SNSL254_p_0181 putative exonuclease
SNSL254_A0534 dnaX; DNA polymerase III, tau subunit
SNSL254_A4913 holD; DNA polymerase III, psi subunit
SNSL254_A2035 conserved domain protein
SNSL254_A4599 ssb2; single-stranded DNA-binding protein
SNSL254_p_0108 ssb; single-strand DNA-binding protein
SNSL254_A2942 retron EC67 DNA adenine methylase
SNSL254_A3756 dam; DNA adenine methylase
SNSL254_A2154 very short patch repair protein
SNSL254_A3220 recB; exodeoxyribonuclease V, beta subunit
SNSL254_A3222 recC; exodeoxyribonuclease V, gamma subunit
SNSL254_A3219 recD; exodeoxyribonuclease V, alpha subunit
SNSL254_A3031 recA; protein RecA
SNSL254_A2054 ruvA; Holliday junction DNA helicase RuvA
SNSL254_A2053 ruvB; holliday junction DNA helicase RuvB
SNSL254_A2057 ruvC; crossover junction endodeoxyribonuclease RuvC
SNSL254_A4425 primosomal protein N'
SNSL254_A4752 priB; primosomal replication protein N
SNSL254_A0531 primosomal replication protein N''
SNSL254_A4899 primosomal protein 1
SNSL254_A0438 exonuclease SbcC
SNSL254_A0439 exonuclease SbcD
SNSL254_A4937 radA; DNA repair protein RadA
SNSL254_A4121 DNA replication and repair protein RecF
SNSL254_A4024 recG; ATP-dependent DNA helicase RecG
SNSL254_A2782 recO; DNA repair protein RecO
SNSL254_A0537 recR; recombination protein RecR
SNSL254_A2897 recN; DNA repair protein RecN
SNSL254_A0435 rdgC; recombination-associated exonuclease RdgC
SNSL254_A3148 cas1; CRISPR-associated protein Cas1
SNSL254_A2417 putative helicase
SNSL254_A2457 gyrA; DNA gyrase, A subunit
SNSL254_A4120 gyrB; DNA gyrase, B subunit
SNSL254_A1841 topA; DNA topoisomerase I
SNSL254_A4503 hupA; DNA-binding protein HU-alpha
SNSL254_A0500 hupB; DNA-binding protein HU-beta
SNSL254_p_0022 hup; DNA-binding protein HU
SNSL254_A2842 gifsy-1 prophage RecE
SNSL254_A1046 gifsy-1 prophage RecE
SNSL254_A3649 fis; DNA-binding protein Fis
SNSL254_A1450 ihfA; integration host factor, alpha subunit
SNSL254_A1015 ihfB; integration host factor, beta subunit
SNSL254_A4238 recQ; ATP-dependent DNA helicase RecQ
SNSL254_A1878 H-NS histone family protein
SNSL254_p_0196 hypothetical protein
SNSL254_A0352 dinB; DNA polymerase IV
SNSL254_A2162 protein UmuC
SNSL254_A2163 protein UmuD
SNSL254_A4580 lexA; LexA repressor
SNSL254_A0103 DNA polymerase II
SNSL254_A1259 dinI; DNA-damage-inducible protein I
SNSL254_A1058 conserved domain protein
SNSL254_A2831 conserved domain protein
SNSL254_A3030 recX; regulatory protein RecX
SNSL254_A3782 conserved hypothetical protein
SNSL254_A4193 rep; ATP-dependent DNA helicase Rep
SNSL254_A1116 helicase IV
SNSL254_A0884 probable ATP-dependent helicase DinG
SNSL254_A1961 conserved hypothetical protein
SNSL254_A3007 ribonucleoside-diphosphate reductase, alpha subunit
SNSL254_A2462 nrdA; ribonucleoside-diphosphate reductase, alpha subunit
SNSL254_A3008 ribonucleoside-diphosphate reductase, beta subunit
SNSL254_A2463 nrdB; ribonucleoside-diphosphate reductase, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K19789 radD; DNA repair protein RadD
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K12149 dinI; DNA-damage-inducible protein I
K12149 dinI; DNA-damage-inducible protein I
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:see03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Salmonella enterica subsp. enterica serovar Newport SL254