KEGG Orthology (KO) - Ruegeria sp. TM1040

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
     00250 Alanine, aspartate and glutamate metabolism [PATH:sit00250]
     00260 Glycine, serine and threonine metabolism [PATH:sit00260]
     00270 Cysteine and methionine metabolism [PATH:sit00270]
     00280 Valine, leucine and isoleucine degradation [PATH:sit00280]
     00290 Valine, leucine and isoleucine biosynthesis [PATH:sit00290]
     00300 Lysine biosynthesis [PATH:sit00300]
       TM1040_2164 homoserine dehydrogenase
       TM1040_0554 aspartate kinase
       TM1040_1934 aspartate kinase
       TM1040_3459 aspartate semialdehyde dehydrogenase
       TM1040_1594 dihydrodipicolinate synthetase
       TM1040_0150 dihydrodipicolinate synthase
       TM1040_0087 dihydrodipicolinate reductase
       TM1040_3009 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
       TM1040_0665 acetylornithine aminotransferase
       TM1040_2996 succinyldiaminopimelate desuccinylase
       TM1040_3116 succinyldiaminopimelate desuccinylase
       TM1040_2809 diaminopimelate epimerase
       TM1040_3495 diaminopimelate decarboxylase
       TM1040_0107 saccharopine dehydrogenase (NAD+, L-lysine-forming)
       TM1040_2018 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
       TM1040_2019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
K00928 lysC; aspartate kinase [EC:2.7.2.4]
K00928 lysC; aspartate kinase [EC:2.7.2.4]
K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
     00310 Lysine degradation [PATH:sit00310]
     00220 Arginine biosynthesis [PATH:sit00220]
     00330 Arginine and proline metabolism [PATH:sit00330]
     00340 Histidine metabolism [PATH:sit00340]
     00350 Tyrosine metabolism [PATH:sit00350]
     00360 Phenylalanine metabolism [PATH:sit00360]
     00380 Tryptophan metabolism [PATH:sit00380]
     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sit00400]
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:sit01000]
     01001 Protein kinases [BR:sit01001]
     01009 Protein phosphatases and associated proteins [BR:sit01009]
     01002 Peptidases and inhibitors [BR:sit01002]
       TM1040_0092 signal peptidase II. Aspartic peptidase. MEROPS family A08
       TM1040_2354 membrane protein; putative
       TM1040_1375 GMP synthase (glutamine-hydrolyzing)
       TM1040_3054 glutamine amidotransferase
       TM1040_0710 peptidase C26
       TM1040_1787 amidophosphoribosyltransferase
       TM1040_2823 glutamate synthase (NADPH) large subunit
       TM1040_0727 glutamine--fructose-6-phosphate transaminase
       TM1040_3149 Glutamine-fructose-6-phosphate transaminase (isomerizing)
       TM1040_1105 ErfK/YbiS/YcfS/YnhG
       TM1040_2898 Twin-arginine translocation pathway signal
       TM1040_1218 Peptidoglycan-binding domain 1
       TM1040_2677 Abortive infection protein
       TM1040_2149 Abortive infection protein
       TM1040_0706 alanyl aminopeptidase. Metallo peptidase. MEROPS family M01
       TM1040_0465 peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A
       TM1040_0569 Peptidase M3B oligoendopeptidase-related clade 3
       TM1040_1599 Hemolysin-type calcium-binding region
       TM1040_0094 peptidase M16-like protein
       TM1040_0095 peptidase M16-like protein
       TM1040_3455 Leucyl aminopeptidase
       TM1040_0950 Leucyl aminopeptidase
       TM1040_0039 dipeptidase AC. Metallo peptidase. MEROPS family M19
       TM1040_0564 peptidase M19 renal dipeptidase
       TM1040_3382 peptidase M19 renal dipeptidase
       TM1040_2996 succinyldiaminopimelate desuccinylase
       TM1040_3116 succinyldiaminopimelate desuccinylase
       TM1040_0648 peptidase T. Metallo peptidase. MEROPS family M20B
       TM1040_2689 Amidase hydantoinase/carbamoylase
       TM1040_2469 methionine aminopeptidase, type I
       TM1040_2712 peptidase M24
       TM1040_0641 peptidase M24
       TM1040_1334 carboxypeptidase Taq. Metallo peptidase. MEROPS family M32
       TM1040_2361 ATP-dependent metalloprotease FtsH
       TM1040_1409 RseP peptidase. Metallo peptidase. MEROPS family M50B
       TM1040_2663 murein endopeptidase. Metallo peptidase. MEROPS family M74
       TM1040_0527 peptidase S1 and S6 chymotrypsin/Hap
       TM1040_2499 peptidase S1 and S6 chymotrypsin/Hap
       TM1040_1953 Peptidase S1C Do
       TM1040_3590 Serine-type D-Ala-D-Ala carboxypeptidase
       TM1040_2259 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
       TM1040_1527 ATP-dependent Clp protease proteolytic subunit ClpP
       TM1040_0775 Lon-A peptidase. Serine peptidase. MEROPS family S16
       TM1040_1135 SOS-response transcriptional repressor, LexA
       TM1040_2560 signal peptidase I. Serine peptidase. MEROPS family S26A
       TM1040_2907 prolyl aminopeptidase. Serine peptidase. MEROPS family S33
       TM1040_3670 alpha/beta hydrolase fold
       TM1040_2755 carboxyl-terminal protease
       TM1040_1354 Penicillin amidase
       TM1040_1696 Rhomboid-like protein
       TM1040_1060 gp35; Putative prohead protease (GP4)
       TM1040_1669 prohead peptidase. Unknown type peptidase. MEROPS family U35
       TM1040_2849 HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B
       TM1040_0064 gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03
       TM1040_0482 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03
       TM1040_3598 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03
       TM1040_2639 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62
       TM1040_2337 microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62
       TM1040_2773 alpha-2-macroglobulin-like protein
       TM1040_1955 HflC protein
       TM1040_1956 HflK protein
K03101 lspA; signal peptidase II [EC:3.4.23.36]
K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K07010 K07010; putative glutamine amidotransferase
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K16291 erfK; L,D-transpeptidase ErfK/SrfK
K16291 erfK; L,D-transpeptidase ErfK/SrfK
K21470 ycbB; L,D-transpeptidase YcbB
K07052 K07052; CAAX protease family protein
K07052 K07052; CAAX protease family protein
K01256 pepN; aminopeptidase N [EC:3.4.11.2]
K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
K01406 prtC; serralysin [EC:3.4.24.40]
K07263 pqqL; zinc protease [EC:3.4.24.-]
K07263 pqqL; zinc protease [EC:3.4.24.-]
K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
K02083 allC; allantoate deiminase [EC:3.5.3.9]
K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
K04775 ydgD; protease YdgD [EC:3.4.21.-]
K04775 ydgD; protease YdgD [EC:3.4.21.-]
K04771 degP; serine protease Do [EC:3.4.21.107]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03100 lepB; signal peptidase I [EC:3.4.21.89]
K01259 pip; proline iminopeptidase [EC:3.4.11.5]
K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
K01434 pac; penicillin G amidase [EC:3.5.1.11]
K07059 K07059; rhomboid family protein
K06904 GP4; Escherichia/Staphylococcus phage prohead protease
K06904 GP4; Escherichia/Staphylococcus phage prohead protease
K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
K03592 pmbA; PmbA protein
K03568 tldD; TldD protein
K06894 yfhM; alpha-2-macroglobulin
K04087 hflC; modulator of FtsH protease HflC
K04088 hflK; modulator of FtsH protease HflK
     01003 Glycosyltransferases [BR:sit01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:sit01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:sit01011]
     01004 Lipid biosynthesis proteins [BR:sit01004]
     01008 Polyketide biosynthesis proteins [BR:sit01008]
     01006 Prenyltransferases [BR:sit01006]
     01007 Amino acid related enzymes [BR:sit01007]
     00199 Cytochrome P450 [BR:sit00199]
     00194 Photosynthesis proteins [BR:sit00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 23, 2024