SSIL_2687 aspartate/tyrosine/aromatic aminotransferase
       SSIL_2737 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
       SSIL_0095 asparagine synthase
       SSIL_3466 predicted amidohydrolase
       SSIL_1170 alanine dehydrogenase
       SSIL_2418 ansB; aspartate ammonia-lyase
       SSIL_2355 argininosuccinate synthase
       SSIL_2354 argininosuccinate lyase
       SSIL_3803 argininosuccinate lyase
       SSIL_0132 adenylosuccinate synthase
       SSIL_0476 adenylosuccinate lyase
       SSIL_3075 aspartate carbamoyltransferase, catalytic chain
       SSIL_1044 gltA; glutamate synthase domain 2
       SSIL_1045 gltB; NADPH-dependent glutamate synthase beta chain
       SSIL_1086 glutamate dehydrogenase/leucine dehydrogenase
       SSIL_2641 glutamate dehydrogenase/leucine dehydrogenase
       SSIL_0523 NAD-dependent aldehyde dehydrogenase
       SSIL_1551 glnA; glutamine synthetase
       SSIL_2764 glutamine synthetase
       SSIL_3072 carbamoylphosphate synthase large subunit
       SSIL_3073 carbamoylphosphate synthase small subunit
       SSIL_2669 glutaminase
       SSIL_0479 phosphoribosylformylglycinamidine synthase, glutamine amidotransferase domain
       SSIL_0272 glucosamine 6-phosphate synthetase
       SSIL_0481 glutamine phosphoribosylpyrophosphate amidotransferase

K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K13566 NIT2; omega-amidase [EC:3.5.1.3]
K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K01425 glsA; glutaminase [EC:3.5.1.2]
K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]

       SSIL_1222 ornithine carbamoyltransferase
       SSIL_2355 argininosuccinate synthase
       SSIL_2354 argininosuccinate lyase
       SSIL_3803 argininosuccinate lyase
       SSIL_0265 arginase/agmatinase/formimionoglutamate hydrolase
       SSIL_3667 nitric oxide synthase, oxygenase domain
       SSIL_2669 glutaminase
       SSIL_0479 phosphoribosylformylglycinamidine synthase, glutamine amidotransferase domain
       SSIL_1551 glnA; glutamine synthetase
       SSIL_2764 glutamine synthetase
       SSIL_1086 glutamate dehydrogenase/leucine dehydrogenase
       SSIL_2641 glutamate dehydrogenase/leucine dehydrogenase
       SSIL_2687 aspartate/tyrosine/aromatic aminotransferase
       SSIL_1148 argJ; N-acetylglutamate synthase
       SSIL_1149 acetylglutamate kinase
       SSIL_1147 acetylglutamate semialdehyde dehydrogenase
       SSIL_1150 ornithine/acetylornithine aminotransferase

K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
K01476 E3.5.3.1; arginase [EC:3.5.3.1]
K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
K01425 glsA; glutaminase [EC:3.5.1.2]
K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]

       SSIL_0417 alanine racemase
       SSIL_1125 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
       SSIL_0408 D-alanine-D-alanine ligase
       SSIL_2669 glutaminase
       SSIL_0479 phosphoribosylformylglycinamidine synthase, glutamine amidotransferase domain
       SSIL_1266 glutamate racemase
       SSIL_3099 UDP-N-acetylmuramoylalanine-D-glutamate ligase
       SSIL_1568 L-alanine-DL-glutamate epimerase
       SSIL_3638 L-alanine-DL-glutamate epimerase
       SSIL_2640 D-serine dehydratase
       SSIL_2102 diaminopimelate epimerase
       SSIL_2782 diaminopimelate decarboxylase

K01775 alr; alanine racemase [EC:5.1.1.1]
K00824 dat; D-alanine transaminase [EC:2.6.1.21]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01425 glsA; glutaminase [EC:3.5.1.2]
K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]

       SSIL_1192 signal transduction histidine kinase
       SSIL_1191 phoP; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_1773 alkaline phosphatase
       SSIL_1649 ABC-type phosphate transport system, periplasmic component
       SSIL_1587 ABC-type phosphate transport system, periplasmic component
       SSIL_2651 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain
       SSIL_3280 flagellin
       SSIL_3281 flagellin
       SSIL_2969 DNA-directed RNA polymerase specialized sigma subunit
       SSIL_0620 motA; flagellar motor component
       SSIL_3789 osmosensitive K+ channel histidine kinase
       SSIL_3669 uncharacterized protein
       SSIL_3670 hypothetical protein
       SSIL_3671 uncharacterized protein
       SSIL_2771 resE; signal transduction histidine kinase
       SSIL_2772 resD; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_2404 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_3133 uncharacterized protein required for cytochrome oxidase assembly
       SSIL_0135 signal transduction histidine kinase
       SSIL_1654 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_0134 yycF; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_0104 dnaA; ATPase
       SSIL_0215 signal transduction histidine kinase
       SSIL_0214 bceR; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_0216 bceA; ABC-type antimicrobial peptide transport system, ATPase component
       SSIL_0217 ABC-type antimicrobial peptide transport system, permease component
       SSIL_0721 signal transduction histidine kinase
       SSIL_0720 yxdJ; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_0722 yxdL; ABC-type antimicrobial peptide transport system, ATPase component
       SSIL_0723 ABC-type antimicrobial peptide transport system, permease component
       SSIL_0402 D-alanyl-D-alanine carboxypeptidase
       SSIL_1987 D-alanyl-D-alanine carboxypeptidase
       SSIL_2105 signal transduction histidine kinase
       SSIL_1669 signal transduction histidine kinase
       SSIL_1670 ykoG; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_2104 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
       SSIL_0471 signal transduction histidine kinase
       SSIL_3185 signal transduction histidine kinase
       SSIL_0143 signal transduction histidine kinase
       SSIL_3398 FOG: CheY-like receiver
       SSIL_1468 hypothetical protein
       SSIL_1707 stage 0 sporulation protein A
       SSIL_2650 malic enzyme
       SSIL_3545 predicted signal transduction protein with a C-terminal ATPase domain
       SSIL_3544 response regulator of the LytR/AlgR family
       SSIL_3282 carbon storage regulator
       SSIL_3295 degS; signal transduction histidine kinase
       SSIL_3294 degU; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
       SSIL_0450 desK; signal transduction histidine kinase
       SSIL_0451 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
       SSIL_0449 fatty acid desaturase
       SSIL_2819 vraS; signal transduction histidine kinase
       SSIL_2820 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
       SSIL_2816 ABC-type uncharacterized transport system, permease component
       SSIL_2817 phage shock protein A, suppresses sigma54-dependent transcription
       SSIL_0856 uncharacterized conserved protein
       SSIL_2818 predicted membrane protein
       SSIL_0454 nitrogen regulatory protein PII
       SSIL_1551 glnA; glutamine synthetase
       SSIL_2764 glutamine synthetase
       SSIL_3407 acetyl-CoA acetyltransferase
       SSIL_2798 acetyl-CoA acetyltransferase
       SSIL_2631 acetyl-CoA acetyltransferase
       SSIL_1843 acetyl-CoA acetyltransferase
       SSIL_1737 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
       SSIL_3653 Tfp pilus assembly protein, major pilin PilA
       SSIL_2715 cheR; methylase of chemotaxis methyl-accepting protein
       SSIL_0975 methylase of chemotaxis methyl-accepting protein
       SSIL_3385 mcpA; methyl-accepting chemotaxis protein
       SSIL_1663 methyl-accepting chemotaxis protein
       SSIL_3433 methyl-accepting chemotaxis protein
       SSIL_3539 methyl-accepting chemotaxis protein
       SSIL_0964 tlpA; methyl-accepting chemotaxis protein
       SSIL_0965 methyl-accepting chemotaxis protein
       SSIL_0967 methyl-accepting chemotaxis protein
       SSIL_1914 methyl-accepting chemotaxis protein
       SSIL_1067 methyl-accepting chemotaxis protein
       SSIL_2908 methyl-accepting chemotaxis protein
       SSIL_3747 methyl-accepting chemotaxis protein
       SSIL_1197 methyl-accepting chemotaxis protein
       SSIL_0359 methyl-accepting chemotaxis protein
       SSIL_0531 methyl-accepting chemotaxis protein
       SSIL_0547 methyl-accepting chemotaxis protein
       SSIL_2973 cheW; chemotaxis signal transduction protein
       SSIL_1730 chemotaxis signal transduction protein
       SSIL_2974 cheA; chemotaxis protein histidine kinase
       SSIL_0976 signal transduction histidine kinase
       SSIL_2984 cheY; FOG: CheY-like receiver
       SSIL_2975 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
       SSIL_3177 cheV; chemotaxis signal transduction protein
       SSIL_0072 signal transduction histidine kinase
       SSIL_0073 glnL; FOG: CheY-like receiver
       SSIL_2669 glutaminase
       SSIL_2366 predicted signal transduction protein with a C-terminal ATPase domain
       SSIL_2365 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
       SSIL_3680 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
       SSIL_0356 protein-tyrosine-phosphatase
       SSIL_3379 UDP-N-acetylglucosamine 2-epimerase
       SSIL_3351 UDP-N-acetyl-D-mannosaminuronate dehydrogenase
       SSIL_3288 negative regulator of flagellin synthesis

K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
K02040 pstS; phosphate transport system substrate-binding protein
K02040 pstS; phosphate transport system substrate-binding protein
K04771 degP; serine protease Do [EC:3.4.21.107]
K02406 fliC; flagellin
K02406 fliC; flagellin
K02405 fliA; RNA polymerase sigma factor FliA
K02556 motA; chemotaxis protein MotA
K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
K07793 tctA; putative tricarboxylic transport membrane protein
K07794 tctB; putative tricarboxylic transport membrane protein
K07795 tctC; putative tricarboxylic transport membrane protein
K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
K07775 resD; two-component system, OmpR family, response regulator ResD
K07775 resD; two-component system, OmpR family, response regulator ResD
K02259 COX15; heme a synthase [EC:1.17.99.9]
K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
K07668 vicR; two-component system, OmpR family, response regulator VicR
K07668 vicR; two-component system, OmpR family, response regulator VicR
K02313 dnaA; chromosomal replication initiator protein
K11629 bceS; two-component system, OmpR family, bacitracin resistance sensor histidine kinase BceS [EC:2.7.13.3]
K11630 bceR; two-component system, OmpR family, bacitracin resistance response regulator BceR
K11631 bceA; bacitracin transport system ATP-binding protein
K11632 bceB; bacitracin transport system permease protein
K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
K11635 yxdL; putative ABC transport system ATP-binding protein
K11636 yxdM; putative ABC transport system permease protein
K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
K18941 arlR; two-component system, OmpR family, response regulator ArlR
K18941 arlR; two-component system, OmpR family, response regulator ArlR
K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
K06375 spo0B; stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-]
K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
K07707 agrA; two-component system, LytTR family, response regulator AgrA
K03563 csrA; carbon storage regulator
K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
K07692 degU; two-component system, NarL family, response regulator DegU
K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
K07693 desR; two-component system, NarL family, response regulator DesR
K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
K11618 liaR; two-component system, NarL family, response regulator LiaR
K11619 liaI; lia operon protein LiaI
K11620 liaH; lia operon protein LiaH
K11621 liaG; lia operon protein LiaG
K11622 liaF; lia operon protein LiaF
K04751 glnB; nitrogen regulatory protein P-II 1
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
K03092 rpoN; RNA polymerase sigma-54 factor
K02650 pilA; type IV pilus assembly protein PilA
K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03406 mcp; methyl-accepting chemotaxis protein
K03408 cheW; purine-binding chemotaxis protein CheW
K03408 cheW; purine-binding chemotaxis protein CheW
K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
K07719 glnL; two-component system, response regulator GlnL
K01425 glsA; glutaminase [EC:3.5.1.2]
K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
K07720 yesN; two-component system, response regulator YesN
K07720 yesN; two-component system, response regulator YesN
K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
K02398 flgM; negative regulator of flagellin synthesis FlgM