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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:snp03030]
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03410 Base excision repair [PATH:snp03410]
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03420 Nucleotide excision repair [PATH:snp03420]
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03430 Mismatch repair [PATH:snp03430]
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03440 Homologous recombination [PATH:snp03440]
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 SPAP_0598 Single-stranded DNA-specific exonuclease
SPAP_1562 Single-stranded DNA-binding protein
SPAP_1929 Single-stranded DNA-binding protein
SPAP_2270 Recombinational DNA repair ATPase (RecF pathway)
SPAP_0087 Recombinational DNA repair protein (RecF pathway)
SPAP_1677 Recombinational DNA repair protein (RecF pathway)
SPAP_1959 RecA/RadA recombinase
SPAP_0083 DNA polymerase I - 3'-5' exonuclease and polymerase domains
SPAP_0233 Holliday junction resolvasome, DNA-binding subunit
SPAP_0307 Holliday junction resolvasome, helicase subunit
SPAP_1704 RecG-like helicase
SPAP_0421 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
SPAP_0924 DNA polymerase III, alpha subunit
SPAP_0321 DNA polymerase III, alpha subunit
SPAP_0002 DNA polymerase sliding clamp subunit
SPAP_0836 DNA polymerase III, gamma/tau subunits
SPAP_0738 DNA polymerase III, delta subunit
SPAP_0967 ATPase involved in DNA replication
SPAP_1029 DNA polymerase III, epsilon subunit-like 3'-5' exonuclease
SPAP_1741 Primosomal protein N' (replication factor Y) - superfamily II helicase
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:snp03000]
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03021 Transcription machinery [BR:snp03021]
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03019 Messenger RNA biogenesis [BR:snp03019]
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03041 Spliceosome
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03011 Ribosome [BR:snp03011]
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03009 Ribosome biogenesis [BR:snp03009]
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03016 Transfer RNA biogenesis [BR:snp03016]
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03012 Translation factors [BR:snp03012]
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03110 Chaperones and folding catalysts [BR:snp03110]
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04131 Membrane trafficking [BR:snp04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:snp03032]
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03036 Chromosome and associated proteins [BR:snp03036]
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03400 DNA repair and recombination proteins [BR:snp03400]
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SPAP_1491 Methylated DNA-protein cysteine methyltransferase
SPAP_1045 Uracil DNA glycosylase
SPAP_1253 A/G-specific DNA glycosylase
SPAP_1304 Predicted EndoIII-related endonuclease
SPAP_1046 NTP pyrophosphohydrolase including oxidative damage repair enzymes
SPAP_1774 NTP pyrophosphohydrolase including oxidative damage repair enzymes
SPAP_1260 NTP pyrophosphohydrolase including oxidative damage repair enzymes
SPAP_0715 NTP pyrophosphohydrolase including oxidative damage repair enzymes
SPAP_0786 NTP pyrophosphohydrolase including oxidative damage repair enzymes
SPAP_0073 dUTPase
SPAP_0234 3-methyladenine DNA glycosylase
SPAP_1002 Formamidopyrimidine-DNA glycosylase
SPAP_1838 Exonuclease III
SPAP_0598 Single-stranded DNA-specific exonuclease
SPAP_1076 NAD-dependent DNA ligase (contains BRCT domain type II)
SPAP_0083 DNA polymerase I - 3'-5' exonuclease and polymerase domains
SPAP_0239 Excinuclease ATPase subunit
SPAP_1263 Helicase subunit of the DNA excision repair complex
SPAP_0604 Nuclease subunit of the excinuclease complex
SPAP_1105 Superfamily I DNA and RNA helicase
SPAP_1971 DNA-directed RNA polymerase, beta subunit/140 kD subunit
SPAP_1970 DNA-directed RNA polymerase, beta' subunit/160 kD subunit
SPAP_0284 DNA-directed RNA polymerase, alpha subunit/40 kD subunit
SPAP_0496 DNA-directed RNA polymerase, delta subunit
SPAP_1742 DNA-directed RNA polymerase, subunit K/omega
SPAP_0006 Transcription-repair coupling factor (superfamily II helicase)
SPAP_2122 Mismatch repair ATPase (MutS family)
SPAP_0426 Mismatch repair ATPase (MutS family)
SPAP_0227 DNA mismatch repair enzyme (predicted ATPase)
SPAP_1233 Exonuclease VII, large subunit
SPAP_1232 Exonuclease VII small subunit
SPAP_0924 DNA polymerase III, alpha subunit
SPAP_0321 DNA polymerase III, alpha subunit
SPAP_0002 DNA polymerase sliding clamp subunit
SPAP_0738 DNA polymerase III, delta subunit
SPAP_0967 ATPase involved in DNA replication
SPAP_1029 DNA polymerase III, epsilon subunit-like 3'-5' exonuclease
SPAP_0836 DNA polymerase III, gamma/tau subunits
SPAP_1562 Single-stranded DNA-binding protein
SPAP_1929 Single-stranded DNA-binding protein
SPAP_1846 Site-specific DNA methylase
SPAP_0421 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
SPAP_1959 RecA/RadA recombinase
SPAP_0233 Holliday junction resolvasome, DNA-binding subunit
SPAP_0307 Holliday junction resolvasome, helicase subunit
SPAP_1741 Primosomal protein N' (replication factor Y) - superfamily II helicase
SPAP_0075 Predicted ATP-dependent serine protease
SPAP_2270 Recombinational DNA repair ATPase (RecF pathway)
SPAP_1704 RecG-like helicase
SPAP_0087 Recombinational DNA repair protein (RecF pathway)
SPAP_1677 Recombinational DNA repair protein (RecF pathway)
SPAP_1228 ATPase involved in DNA repair
SPAP_0394 Penicillin-binding protein-related factor A, putative recombinase
SPAP_1061 ATP-dependent exoDNAse (exonuclease V) beta subunit
SPAP_1062 ATP-dependent nuclease, subunit B
SPAP_1245 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
SPAP_0782 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
SPAP_1287 Topoisomerase IA
SPAP_1080 Bacterial nucleoid DNA-binding protein
SPAP_0472 Nucleotidyltransferase/DNA polymerase involved in DNA repair
SPAP_0027 Predicted transcriptional regulator
SPAP_1920 Uncharacterized protein conserved in bacteria
SPAP_0778 Rad3-related DNA helicase
SPAP_1209 Ribonucleotide reductase, alpha subunit
SPAP_1210 Ribonucleotide reductase, beta subunit
SPAP_1325 hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:snp03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Streptococcus pneumoniae AP200 (serotype 11A)