| |
KO |
 09100 Metabolism
|
|
|
 09101 Carbohydrate metabolism
|
|
|
09102 Energy metabolism
|
|
|
09103 Lipid metabolism
|
|
|
09104 Nucleotide metabolism
|
00230 Purine metabolism [PATH:srl00230]
|
00240 Pyrimidine metabolism [PATH:srl00240]
|
 SOD_c05800 carB; carbamoyl-phosphate synthase large chain
SOD_c05790 carA; carbamoyl-phosphate synthase small chain
SOD_c04280 pyrB; aspartate carbamoyltransferase PyrB
SOD_c04270 pyrI; aspartate carbamoyltransferase regulatory chain
SOD_c17230 pyrC; dihydroorotase PyrC
SOD_c41840 dihydroorotase
SOD_c16050 pyrD; dihydroorotate dehydrogenase PyrD
SOD_c46580 pyrE; orotate phosphoribosyltransferase PyrE
SOD_c24990 pyrF; orotidine 5'-phosphate decarboxylase PyrF
SOD_c37530 pyrH; uridylate kinase PyrH
SOD_c35470 ndk; nucleoside diphosphate kinase Ndk
SOD_c06670 mazG; nucleoside triphosphate pyrophosphohydrolase MazG
SOD_c42110 Maf-like protein
SOD_c41190 ygjP; ygjp
SOD_c06680 pyrG1; CTp synthase PyrG
SOD_c15740 cmk; cytidylate kinase Cmk
SOD_c25580 nudG; CTp pyrophosphohydrolase NudG
SOD_c14450 udk; uridine kinase Udk
SOD_c09790 ushA; protein UshA
SOD_c06920 surE; 5'/3'-nucleotidase SurE
SOD_c10950 nagD; ribonucleotide monophosphatase NagD
SOD_c42040 rihB1; pyrimidine-specific ribonucleoside hydrolase RihB
SOD_c01960 udp; uridine phosphorylase Udp
SOD_c08770 UpF0345 protein
SOD_c34520 upp; uracil phosphoribosyltransferase Upp
SOD_c03270 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
SOD_c11410 yfkN; trifunctional nucleotide phosphoesterase protein YfkN
SOD_c18070 psuK; pseudouridine kinase PsuK
SOD_c18080 psuG2; pseudouridine-5'-phosphate glycosidase 2
SOD_c10760 rihA; pyrimidine-specific ribonucleoside hydrolase RihA
SOD_c37660 ygdH; LOG family protein YgdH
SOD_c14370 cdd; cytidine deaminase Cdd
SOD_c43940 codA; cytosine deaminase CodA
SOD_c30640 codA1; cytosine deaminase CodA
SOD_c04060 nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD
SOD_c14460 dcd; deoxycytidine triphosphate deaminase Dcd
SOD_c36930 nrdE2; ribonucleoside-diphosphate reductase subunit alpha 2
SOD_c31880 nrdA; ribonucleoside-diphosphate reductase 1 subunit alpha
SOD_c31890 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta
SOD_c36940 nrdF; ribonucleoside-diphosphate reductase 2 subunit beta
SOD_c32270 UpF0207 protein
SOD_c17390 tmk; thymidylate kinase Tmk
SOD_c46560 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
SOD_c05320 deoA; thymidine phosphorylase DeoA
SOD_c25460 tdk; thymidine kinase Tdk
SOD_c37870 thyA; thymidylate synthase ThyA
SOD_c24190 amaB; N-carbamoyl-L-amino acid hydrolase AmaB
SOD_c16480 rutA; pyrimidine monooxygenase RutA
SOD_c16440 rutF; FMN reductase (NADH) RutF
SOD_c16470 rutB; peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
SOD_c16460 rutC; aminoacrylate peracid reductase RutC
SOD_c16450 rutD; aminoacrylate hydrolase RutD
SOD_c21150 ydfG1; NADp-dependent L-serine/L-allo-threonine dehydrogenase YdfG
|
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
K01465 URA4; dihydroorotase [EC:3.5.2.3]
K01465 URA4; dihydroorotase [EC:3.5.2.3]
K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
K09903 pyrH; uridylate kinase [EC:2.7.4.22]
K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
K01937 pyrG; CTP synthase [EC:6.3.4.2]
K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
K00876 udk; uridine kinase [EC:2.7.1.48]
K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
K00757 udp; uridine phosphorylase [EC:2.4.2.3]
K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-]
K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
K01489 cdd; cytidine deaminase [EC:3.5.4.5]
K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
K01494 dcd; dCTP deaminase [EC:3.5.4.13]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
K00943 tmk; dTMP kinase [EC:2.7.4.9]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
K00857 tdk; thymidine kinase [EC:2.7.1.21]
K00560 thyA; thymidylate synthase [EC:2.1.1.45]
K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46]
K09024 rutF; flavin reductase [EC:1.5.1.-]
K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
K09021 rutC; aminoacrylate peracid reductase
K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-]
K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
|
|
|
09105 Amino acid metabolism
|
|
|
09106 Metabolism of other amino acids
|
|
|
09107 Glycan biosynthesis and metabolism
|
|
|
09108 Metabolism of cofactors and vitamins
|
|
|
09109 Metabolism of terpenoids and polyketides
|
|
|
09110 Biosynthesis of other secondary metabolites
|
|
|
09111 Xenobiotics biodegradation and metabolism
|
|
|
09112 Not included in regular maps
|
|
|
09120 Genetic Information Processing
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:srl03000]
|
03021 Transcription machinery [BR:srl03021]
|
03019 Messenger RNA biogenesis [BR:srl03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:srl03011]
|
03009 Ribosome biogenesis [BR:srl03009]
|
03016 Transfer RNA biogenesis [BR:srl03016]
|
03012 Translation factors [BR:srl03012]
|
03110 Chaperones and folding catalysts [BR:srl03110]
|
04131 Membrane trafficking [BR:srl04131]
|
04121 Ubiquitin system [BR:srl04121]
|
03051 Proteasome [BR:srl03051]
|
03032 DNA replication proteins [BR:srl03032]
|
03036 Chromosome and associated proteins [BR:srl03036]
|
03400 DNA repair and recombination proteins [BR:srl03400]
|
SOD_c24350 ogt; methylated-DNA--protein-cysteine methyltransferase Ogt
SOD_c11220 phrB; deoxyribodipyrimidine photo-lyase PhrB
SOD_c36550 ung; uracil-DNA glycosylase Ung
SOD_c39910 mutY; A/G-specific adenine glycosylase MutY
SOD_c20600 nth; endonuclease III
SOD_c13190 NUDIX hydrolase
SOD_c06370 mutT; 8-oxo-dGTp diphosphatase MutT
SOD_c31450 hypothetical protein
SOD_c46560 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
SOD_c30460 alkB; alpha-ketoglutarate-dependent dioxygenase AlkB
SOD_c41080 mug; G/U mismatch-specific DNA glycosylase Mug
SOD_c34700 alkA; putative bifunctional transcriptional activator/DNA repair enzyme AlkA
SOD_c00240 tag; DNA-3-methyladenine glycosylase 1
SOD_c46510 mutM; formamidopyrimidine-DNA glycosylase MutM
SOD_c11310 nei; endonuclease 8
SOD_c25570 xthA; exodeoxyribonuclease III
SOD_c31410 nfo; putative endonuclease 4
SOD_c02490 nfi; endonuclease V
SOD_c38460 recJ; single-stranded-DNA-specific exonuclease RecJ
SOD_c46660 ligB; DNA ligase B
SOD_c33630 ligA; DNA ligase LigA
SOD_c46860 polA; DNA polymerase I
SOD_c42490 uvrA; UvrABC system protein A
SOD_c11860 uvrB; UvrABC system protein B
SOD_c16770 uvrC; UvrABC system protein C
SOD_c16900 cho; excinuclease Cho
SOD_c01450 uvrD; DNA helicase II
SOD_c02370 rpoB; DNA-directed RNA polymerase subunit beta
SOD_c02380 rpoC; DNA-directed RNA polymerase subunit beta'
SOD_c43300 rpoA; DNA-directed RNA polymerase subunit alpha
SOD_c46680 rpoZ; DNA-directed RNA polymerase subunit omega
SOD_c18300 mfd; transcription-repair-coupling factor Mfd
SOD_c06960 mutS; DNA mismatch repair protein MutS
SOD_c03020 mutL; DNA mismatch repair protein MutL
SOD_c37910 mutH; DNA mismatch repair protein MutH
SOD_c31270 sbcB; exodeoxyribonuclease I
SOD_c35310 xseA; exodeoxyribonuclease 7 large subunit XseA
SOD_c17700 exoX; exodeoxyribonuclease 10
SOD_c37400 dnaE; DNA polymerase III subunit alpha
SOD_c00020 dnaN; DNA polymerase III subunit beta
SOD_c04370 holC; DNA polymerase III subunit chi
SOD_c10710 holA; DNA polymerase III subunit delta
SOD_c17400 holB; DNA polymerase III subunit delta'
SOD_c07680 dnaQ; DNA polymerase III subunit epsilon
SOD_c09700 dnaX; DNA polymerase III subunit tau
SOD_c17740 holE; DNA polymerase III subunit theta
SOD_c31260 hypothetical protein
SOD_c42480 hypothetical protein
SOD_c44020 dam; DNA adenine methylase Dam
SOD_c37800 recB; exodeoxyribonuclease V beta chain
SOD_c37820 recC; exodeoxyribonuclease V gamma chain
SOD_c37790 recD; exodeoxyribonuclease V alpha chain
SOD_c07080 recA; protein RecA
SOD_c26190 ruvA; holliday junction ATP-dependent DNA helicase RuvA
SOD_c26180 ruvB; holliday junction ATP-dependent DNA helicase RuvB
SOD_c26200 ruvC; crossover junction endodeoxyribonuclease RuvC
SOD_c46000 priA; primosomal protein N'
SOD_c03200 priB; primosomal replication protein n
SOD_c09670 priC; primosomal replication protein N''
SOD_c08910 sbcC; nuclease SbcCD subunit C
SOD_c08920 sbcD; nuclease SbcCD subunit D
SOD_c05370 radA; DNA repair protein RadA
SOD_c00030 recF; DNA replication and repair protein RecF
SOD_c46710 recG; ATP-dependent DNA helicase RecG
SOD_c36390 recO; DNA repair protein RecO
SOD_c09720 recR; recombination protein RecR
SOD_c36580 recN; DNA repair protein RecN
SOD_c08780 rdgC; recombination-associated protein RdgC
SOD_c31660 yejH; YejH
SOD_c43850 yjgR; YjgR
SOD_c31860 gyrA; DNA gyrase subunit A
SOD_c00040 gyrB; DNA gyrase subunit B
SOD_c25080 topA; DNA topoisomerase 1
SOD_c02510 hupA; DNA-binding protein HU-alpha
SOD_c09370 hupB; DNA-binding protein HU-beta
SOD_c42270 fis; DNA-binding protein Fis
SOD_c19630 ihfA; integration host factor subunit alpha
SOD_c15760 ihfB; integration host factor subunit beta
SOD_c01520 recQ; ATP-dependent DNA helicase RecQ
SOD_c25470 hns; DNA-binding protein H-NS
SOD_c08160 dinB; DNA polymerase IV
SOD_c28210 umuC; protein UmuC
SOD_p00460 samB; protein SamB
SOD_c28280 umuD; protein UmuD
SOD_p00470 umuD; error-prone repair protein UmuD
SOD_c42690 lexA; LexA repressor
SOD_c05970 polB; DNA polymerase II
SOD_c17220 dinI; DNA-damage-inducible protein I
SOD_c07090 recX; regulatory protein RecX
SOD_c01120 rep; ATP-dependent DNA helicase rep
SOD_c16230 helD; helicase IV
SOD_c13540 dinG; putative ATP-dependent helicase DinG
SOD_c26040 yoaA; putative ATP-dependent helicase YoaA
SOD_c36930 nrdE2; ribonucleoside-diphosphate reductase subunit alpha 2
SOD_c31880 nrdA; ribonucleoside-diphosphate reductase 1 subunit alpha
SOD_c31890 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta
SOD_c36940 nrdF; ribonucleoside-diphosphate reductase 2 subunit beta
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K19789 radD; DNA repair protein RadD
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
|
03029 Mitochondrial biogenesis [BR:srl03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Serratia plymuthica 4Rx13