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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ssk03030]
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03410 Base excision repair [PATH:ssk03410]
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03420 Nucleotide excision repair [PATH:ssk03420]
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03430 Mismatch repair [PATH:ssk03430]
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03440 Homologous recombination [PATH:ssk03440]
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 SSUD12_0644 single-stranded-DNA-specific exonuclease RecJ
SSUD12_0140 single-stranded DNA-binding protein
SSUD12_1799 single-stranded DNA-binding protein
SSUD12_2154 recF; DNA replication and repair protein RecF
SSUD12_0024 recO; DNA repair protein RecO
SSUD12_0600 recR; recombination protein RecR
SSUD12_0066 recA; RecA protein
SSUD12_0576 polA; DNA polymerase I
SSUD12_0063 ruvA; Holliday junction DNA helicase RuvA
SSUD12_0053 ruvB; Holliday junction DNA helicase RuvB
SSUD12_0331 recG; ATP-dependent DNA helicase
SSUD12_0194 hypothetical protein
SSUD12_1395 dnaE; DNA polymerase III alpha subunit
SSUD12_1924 polC; DNA polymerase III PolC
SSUD12_0002 DNA polymerase III subunit beta
SSUD12_1585 dnaH; DNA polymerase III subunit gamma/tau
SSUD12_1497 holA; DNA polymerase III subunit delta
SSUD12_1139 holB; DNA polymerase III, delta' subunit
SSUD12_0401 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ssk03000]
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03021 Transcription machinery [BR:ssk03021]
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03019 Messenger RNA biogenesis [BR:ssk03019]
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03041 Spliceosome
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03011 Ribosome [BR:ssk03011]
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03009 Ribosome biogenesis [BR:ssk03009]
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03016 Transfer RNA biogenesis [BR:ssk03016]
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03012 Translation factors [BR:ssk03012]
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03110 Chaperones and folding catalysts [BR:ssk03110]
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04131 Membrane trafficking [BR:ssk04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:ssk03032]
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03036 Chromosome and associated proteins [BR:ssk03036]
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03400 DNA repair and recombination proteins [BR:ssk03400]
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SSUD12_1133 methylated DNA-protein cysteine methyltransferase
SSUD12_0881 uracil-DNA glycosylase
SSUD12_0854 A/G-specific DNA glycosylase
SSUD12_0972 Endonuclease III/Nth
SSUD12_0867 NTP pyrophosphohydrolase including oxidative damage repair enzymes
SSUD12_0464 NUDIX hydrolase
SSUD12_0784 mutX; mutator MutX protein (7,8-dihydro-8-oxoguanine-triphosphatase)
SSUD12_2121 MutT/NudX family protein (putative)
SSUD12_2004 deoxyUTP pyrophosphatase
SSUD12_0064 3-methyladenine DNA glycosylase
SSUD12_0550 fpg; formamidopyrimidine-DNA glycosylase
SSUD12_1130 exoA; exodeoxyribonuclease
SSUD12_0644 single-stranded-DNA-specific exonuclease RecJ
SSUD12_0752 ligA; NAD-dependent DNA ligase LigA
SSUD12_0576 polA; DNA polymerase I
SSUD12_1794 uvrA; UvrABC system protein A (UvrA protein)
SSUD12_0863 uvrB; UvrABC system protein B (UvrB protein)
SSUD12_1072 uvrC; UvrABC system protein C
SSUD12_1082 superfamily I DNA/RNA helicase
SSUD12_0119 rpoB; DNA-directed RNA polymerase subunit beta
SSUD12_0120 rpoC; DNA-directed RNA polymerase beta' chain
SSUD12_0100 DNA-directed RNA polymerase subunit alpha
SSUD12_0324 DNA-directed RNA polymerase subunit delta
SSUD12_0400 DNA-directed RNA polymerase subunit omega
SSUD12_0008 transcription-repair coupling factor
SSUD12_2091 DNA mismatch repair protein MutS
SSUD12_0208 mutS2; DNA mismatch repair protein
SSUD12_0062 mutL; DNA mismatch repair protein MutL
SSUD12_1621 xseA; exodeoxyribonuclease VII large subunit
SSUD12_1620 exodeoxyribonuclease VII small subunit
SSUD12_1395 dnaE; DNA polymerase III alpha subunit
SSUD12_1924 polC; DNA polymerase III PolC
SSUD12_0002 DNA polymerase III subunit beta
SSUD12_1497 holA; DNA polymerase III subunit delta
SSUD12_1139 holB; DNA polymerase III, delta' subunit
SSUD12_1585 dnaH; DNA polymerase III subunit gamma/tau
SSUD12_0140 single-stranded DNA-binding protein
SSUD12_1799 single-stranded DNA-binding protein
SSUD12_0036 DNA adenine methylase
SSUD12_0444 conserved hypothetical protein
SSUD12_0194 hypothetical protein
SSUD12_0066 recA; RecA protein
SSUD12_0063 ruvA; Holliday junction DNA helicase RuvA
SSUD12_0053 ruvB; Holliday junction DNA helicase RuvB
SSUD12_0401 primosomal protein N'
SSUD12_2002 DNA repair protein RadA
SSUD12_2154 recF; DNA replication and repair protein RecF
SSUD12_0331 recG; ATP-dependent DNA helicase
SSUD12_0024 recO; DNA repair protein RecO
SSUD12_0600 recR; recombination protein RecR
SSUD12_1616 ATPase involved in DNA repair
SSUD12_0390 recU; Holliday junction-specific endonuclease
SSUD12_1064 addA; ATP-dependent exonuclease subunit A
SSUD12_1065 ATP-dependent nuclease, subunit B
SSUD12_0243 hypothetical protein
SSUD12_0837 gyrA; DNA gyrase subunit A
SSUD12_1483 gyrB; DNA gyrase subunit B
SSUD12_0894 topA; DNA topoisomerase I
SSUD12_1612 nucleoid DNA-binding protein
SSUD12_0189 DNA polymerase IV
SSUD12_1203 ImpB/MucB/SamB family protein
SSUD12_0424 regulatory protein RecX
SSUD12_1380 putative ATP-dependent DNA helicase
SSUD12_0728 ribonucleoside-diphosphate reductase, alpha subunit
SSUD12_0727 nrdF; ribonucleotide-diphosphate reductase subunit beta
SSUD12_1490 phosphoesterase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:ssk03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Streptococcus suis D12 (serotype 9)