09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:ssyr03030]
03410 Base excision repair [PATH:ssyr03410]
SSYRP_v1c09730 ung; uracil-DNA glycosylase SSYRP_v1c01730 yxlJ; 3-methyladenine DNA glycosylase SSYRP_v1c09940 mutM; formamidopyrimidine-DNA glycosylase SSYRP_v1c04280 nfo; endonuclease IV SSYRP_v1c09950 polA; DNA polymerase I SSYRP_v1c09240 ligA; NAD-dependent DNA ligase
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03420 Nucleotide excision repair [PATH:ssyr03420]
03430 Mismatch repair [PATH:ssyr03430]
03440 Homologous recombination [PATH:ssyr03440]
03450 Non-homologous end-joining
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:ssyr03000]
03021 Transcription machinery [BR:ssyr03021]
03019 Messenger RNA biogenesis [BR:ssyr03019]
03041 Spliceosome
03011 Ribosome [BR:ssyr03011]
03009 Ribosome biogenesis [BR:ssyr03009]
03016 Transfer RNA biogenesis [BR:ssyr03016]
03012 Translation factors [BR:ssyr03012]
03110 Chaperones and folding catalysts [BR:ssyr03110]
04131 Membrane trafficking [BR:ssyr04131]
04121 Ubiquitin system
03051 Proteasome
03032 DNA replication proteins [BR:ssyr03032]
03036 Chromosome and associated proteins [BR:ssyr03036]
03400 DNA repair and recombination proteins [BR:ssyr03400]
SSYRP_v1c05340 phrB; putative deoxyribodipyrimidine photolyase protein SSYRP_v1c09730 ung; uracil-DNA glycosylase SSYRP_v1c01730 yxlJ; 3-methyladenine DNA glycosylase SSYRP_v1c10030 adaA; AraC family transcriptional regulator SSYRP_v1c09500 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase SSYRP_v1c09940 mutM; formamidopyrimidine-DNA glycosylase SSYRP_v1c04280 nfo; endonuclease IV SSYRP_v1c09240 ligA; NAD-dependent DNA ligase SSYRP_v1c09950 polA; DNA polymerase I SSYRP_v1c01580 uvrA; excinuclease ABC subunit A SSYRP_v1c01410 uvrB; excinuclease ABC subunit B SSYRP_v1c06420 uvrC; excinuclease ABC subunit C SSYRP_v1c02450 pcrA; ATP-dependent DNA helicase SSYRP_v1c00470 rpoB; DNA-directed RNA polymerase subunit beta SSYRP_v1c00480 rpoC; DNA-directed RNA polymerase subunit beta' SSYRP_v1c02400 rpoA; DNA-directed RNA polymerase subunit alpha SSYRP_v1c01830 DNA directed RNA polymerase subunit delta SSYRP_v1c05760 xseA; exodeoxyribonuclease VII large subunit SSYRP_v1c05750 xseB; putative exodeoxyribonuclease vII small subunit protein SSYRP_v1c07960 dnaE; DNA polymerase III subunit alpha SSYRP_v1c03440 polC; DNA polymerase III subunit alpha (PolC) SSYRP_v1c00020 dnaN; DNA polymerase III subunit beta SSYRP_v1c01340 holA; DNA polymerase III subunit delta SSYRP_v1c00100 holB; DNA polymerase III subunit delta' SSYRP_v1c00070 dnaX; DNA polymerase III subunits gamma and tau SSYRP_v1c00250 ssbA; single-strand DNA-binding protein SSYRP_v1c04000 single-stranded DNA-binding protein SSYRP_v1c07090 dam; DNA adenine methylase SSYRP_v1c04070 recD; exodeoxyribonuclease V subunit alpha SSYRP_v1c05070 recA; recombinase A SSYRP_v1c05950 ruvA; Holliday junction DNA helicase RuvA SSYRP_v1c05940 ruvB; Holliday junction DNA helicase RuvB SSYRP_v1c03460 recO; DNA repair protein recO SSYRP_v1c00080 recR; recombination protein RecR SSYRP_v1c07530 recU; Holliday junction-specific endonuclease SSYRP_v1c09380 cas1; CRISPR-associated protein Cas1 SSYRP_v1c00040 gyrA; DNA gyrase subunit A SSYRP_v1c00030 gyrB; DNA gyrase subunit B SSYRP_v1c04470 topA2; DNA topoisomerase I SSYRP_v1c01970 topA1; DNA topoisomerase I SSYRP_v1c04630 hypothetical protein SSYRP_v1c07550 hupB; DNA-binding protein HU-beta SSYRP_v1c04990 dinB; DNA polymerase IV SSYRP_v1c04410 nrdE; ribonucleoside-diphosphate reductase alpha chain SSYRP_v1c07370 nrdA; ribonucleotide-diphosphate reductase subunit alpha SSYRP_v1c04390 nrdF; ribonucleoside-diphosphate reductase beta chain SSYRP_v1c00320 DHH family protein
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03048 rpoE; DNA-directed RNA polymerase subunit delta K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03700 recU; recombination protein U K15342 cas1; CRISP-associated protein Cas1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:ssyr03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Spiroplasma syrphidicola KEGG Orthology (KO) - Spiroplasma syrphidicola