|
KO |
Eukaryotic type
|
|
|
Prokaryotic type
|
SSBR (single strand breaks repair)
|
DSBR (double strand breaks repair)
|
HR (homologous recombination)
|
RecBC pathway proteins
|
STY3132 recB; exonuclease V subunit
STY3134 recC; exonuclease V subunit
STY3131 recD; exonuclease V subunit alpha
STY2950 recA; RecA protein
STY2103 ruvA; Holliday junction DNA helicase
STY2102 ruvB; Holliday junction DNA helicase
STY2106 ruvC; crossover junction endodeoxyribonuclease
STY3775 priA; primosomal protein replication factor
STY4748 priB; primosomal replication protein N
STY4897 dnaT; primosomal protein I
STY2276 sbcB; exodeoxyribonuclease I
STY0429 sbcC; exonuclease SbcC
STY0430 sbcD; exonuclease SbcD
|
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K02317 dnaT; DNA replication protein DnaT
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
|
RecFOR pathway proteins
|
STY2950 recA; RecA protein
STY4926 radA; DNA repair protein
STY3942 recF; recF protein
STY4048 recG; ATP-dependent DNA helicase
STY3198 recJ; single-stranded DNA-specific exonuclease
STY2825 recO; DNA repair protein RecO
STY0530 recR; recombination protein RecR
STY2870 recN; DNA repair protein
STY0425 rdgC; recombination associated protein RdgC
STY2103 ruvA; Holliday junction DNA helicase
STY2102 ruvB; Holliday junction DNA helicase
STY2106 ruvC; crossover junction endodeoxyribonuclease
|
K03553 recA; recombination protein RecA
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
|
AddAB pathway proteins
|
Other HR factor
|
Archaeal homologous recombinant proteins
|
NHEJ (non-homologous end-joining)
|
TLS (translesion DNA synthesis) factors
|
Other factors with a suspected DNA repair function
|