KEGG Orthology (KO) - Treponema pallidum subsp. pertenue Gauthier

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
     00250 Alanine, aspartate and glutamate metabolism [PATH:tpg00250]
     00260 Glycine, serine and threonine metabolism [PATH:tpg00260]
     00270 Cysteine and methionine metabolism [PATH:tpg00270]
     00280 Valine, leucine and isoleucine degradation
     00290 Valine, leucine and isoleucine biosynthesis
     00300 Lysine biosynthesis [PATH:tpg00300]
       TPEGAU_0933 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
       TPEGAU_0386 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
     00310 Lysine degradation
     00220 Arginine biosynthesis
     00330 Arginine and proline metabolism [PATH:tpg00330]
     00340 Histidine metabolism
     00350 Tyrosine metabolism
     00360 Phenylalanine metabolism
     00380 Tryptophan metabolism
     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tpg00400]
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00511 Other glycan degradation
     00540 Lipopolysaccharide biosynthesis
     00542 O-Antigen repeat unit biosynthesis
     00541 O-Antigen nucleotide sugar biosynthesis
     00550 Peptidoglycan biosynthesis [PATH:tpg00550]
       TPEGAU_0029 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       TPEGAU_0090 murB; UDP-N-acetylmuramate dehydrogenase
       TPEGAU_0341 murC; UDP-N-acetylmuramate--L-alanine ligase
       TPEGAU_0903 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
       TPEGAU_0933 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
       TPEGAU_0670 ddl; D-alanine--D-alanine ligase
       TPEGAU_0386 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       TPEGAU_0603 uppS; di-trans,poly-cis-decaprenylcistransferase
       TPEGAU_0345 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
       TPEGAU_0523 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
       TPEGAU_0705 mrcA; bifunctional membrane carboxypeptidase/penicillin-binding protein
       TPEGAU_0500 pbp1; penicillin-binding protein
       TPEGAU_0760 pbp2; penicillin-binding protein
       TPEGAU_0800 dacC; serine-type D-Ala-D-Ala carboxypeptidase
       TPEGAU_0221 vanY; serine-type D-Ala-D-Ala carboxypeptidase
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
     00552 Teichoic acid biosynthesis [PATH:tpg00552]
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
     00543 Exopolysaccharide biosynthesis [PATH:tpg00543]
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:tpg01000]
     01001 Protein kinases [BR:tpg01001]
     01009 Protein phosphatases and associated proteins [BR:tpg01009]
     01002 Peptidases and inhibitors [BR:tpg01002]
     01003 Glycosyltransferases [BR:tpg01003]
     01005 Lipopolysaccharide biosynthesis proteins
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:tpg01011]
       TPEGAU_0029 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       TPEGAU_0090 murB; UDP-N-acetylmuramate dehydrogenase
       TPEGAU_0341 murC; UDP-N-acetylmuramate--L-alanine ligase
       TPEGAU_0903 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
       TPEGAU_0933 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
       TPEGAU_0670 ddl; D-alanine--D-alanine ligase
       TPEGAU_0681 alr; alanine racemase
       TPEGAU_0406 murI; glutamate racemase
       TPEGAU_0688 ldcA; muramoyltetrapeptide carboxypeptidase
       TPEGAU_0345 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
       TPEGAU_0523 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
       TPEGAU_0516 mviN; integral membrane protein MviN
       TPEGAU_0705 mrcA; bifunctional membrane carboxypeptidase/penicillin-binding protein
       TPEGAU_0500 pbp1; penicillin-binding protein
       TPEGAU_0760 pbp2; penicillin-binding protein
       TPEGAU_0800 dacC; serine-type D-Ala-D-Ala carboxypeptidase
       TPEGAU_0221 vanY; serine-type D-Ala-D-Ala carboxypeptidase
       TPEGAU_0043 putative lytic transglycosylase
       TPEGAU_0623 membrane-bound lytic murein transglycosylase D
       TPEGAU_0491 hypothetical protein
       TPEGAU_0993 rlpA; putative rare lipoprotein A
       TPEGAU_0247 amiC; N-acetylmuramoyl-L-alanine amidase
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K03980 murJ; putative peptidoglycan lipid II flippase
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
     01004 Lipid biosynthesis proteins [BR:tpg01004]
     01008 Polyketide biosynthesis proteins
     01006 Prenyltransferases [BR:tpg01006]
     01007 Amino acid related enzymes [BR:tpg01007]
     00199 Cytochrome P450
     00194 Photosynthesis proteins
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 24, 2024