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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:txy03030]
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03410 Base excision repair [PATH:txy03410]
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03420 Nucleotide excision repair [PATH:txy03420]
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03430 Mismatch repair [PATH:txy03430]
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03440 Homologous recombination [PATH:txy03440]
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 Thexy_1418 single-stranded-DNA-specific exonuclease RecJ
Thexy_2392 single-strand binding protein
Thexy_0004 DNA replication and repair protein recF
Thexy_1496 DNA repair protein recO
Thexy_0048 Recombination protein recR
Thexy_1267 Protein recA
Thexy_1434 Holliday junction ATP-dependent DNA helicase ruvA
Thexy_1433 Holliday junction ATP-dependent DNA helicase ruvB
Thexy_1435 Crossover junction endodeoxyribonuclease ruvC
Thexy_1377 ATP-dependent DNA helicase RecG
Thexy_1897 helicase, RecD/TraA family
Thexy_0632 DNA polymerase III, alpha subunit
Thexy_1291 DNA polymerase III, alpha subunit
Thexy_0002 DNA polymerase III, beta subunit
Thexy_0046 DNA polymerase III, subunits gamma and tau
Thexy_1525 DNA polymerase III, delta subunit
Thexy_0077 DNA polymerase III, delta prime subunit
Thexy_1394 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining [PATH:txy03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:txy03000]
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03021 Transcription machinery [BR:txy03021]
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03019 Messenger RNA biogenesis [BR:txy03019]
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03041 Spliceosome
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03011 Ribosome [BR:txy03011]
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03009 Ribosome biogenesis [BR:txy03009]
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03016 Transfer RNA biogenesis [BR:txy03016]
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03012 Translation factors [BR:txy03012]
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03110 Chaperones and folding catalysts [BR:txy03110]
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04131 Membrane trafficking [BR:txy04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:txy03032]
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03036 Chromosome and associated proteins [BR:txy03036]
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03400 DNA repair and recombination proteins [BR:txy03400]
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Thexy_0188 methylated-DNA/protein-cysteine methyltransferase
Thexy_0679 DNA-(apurinic or apyrimidinic site) lyase
Thexy_0807 endonuclease III
Thexy_1853 DEAD_2 domain protein
Thexy_0403 NUDIX hydrolase
Thexy_0402 NUDIX hydrolase
Thexy_2407 NUDIX hydrolase
Thexy_1277 Deoxyuridine 5'-triphosphate nucleotidohydrolase
Thexy_0068 phage SPO1 DNA polymerase-related protein
Thexy_0071 DNA-3-methyladenine glycosylase I
Thexy_1836 endonuclease 4
Thexy_1418 single-stranded-DNA-specific exonuclease RecJ
Thexy_0731 DNA ligase
Thexy_0523 UvrABC system protein A
Thexy_0522 UvrABC system protein B
Thexy_0527 UvrABC system protein C
Thexy_0412 ATP-dependent DNA helicase replicase
Thexy_0730 ATP-dependent DNA helicase PcrA
Thexy_0326 DNA-directed RNA polymerase subunit beta
Thexy_0327 DNA-directed RNA polymerase subunit beta'
Thexy_0363 DNA-directed RNA polymerase subunit alpha
Thexy_1396 DNA-directed RNA polymerase subunit omega
Thexy_0153 transcription-repair coupling factor
Thexy_1244 DNA mismatch repair protein mutS
Thexy_0592 DNA mismatch repair protein MutS domain protein
Thexy_1032 MutS2 protein
Thexy_1245 DNA mismatch repair protein mutL
Thexy_1186 Exodeoxyribonuclease 7 large subunit
Thexy_1187 Exodeoxyribonuclease 7 small subunit
Thexy_0632 DNA polymerase III, alpha subunit
Thexy_1291 DNA polymerase III, alpha subunit
Thexy_0002 DNA polymerase III, beta subunit
Thexy_1525 DNA polymerase III, delta subunit
Thexy_0077 DNA polymerase III, delta prime subunit
Thexy_0046 DNA polymerase III, subunits gamma and tau
Thexy_2392 single-strand binding protein
Thexy_1897 helicase, RecD/TraA family
Thexy_1267 Protein recA
Thexy_1434 Holliday junction ATP-dependent DNA helicase ruvA
Thexy_1433 Holliday junction ATP-dependent DNA helicase ruvB
Thexy_1435 Crossover junction endodeoxyribonuclease ruvC
Thexy_1394 primosomal protein N'
Thexy_1261 SMC domain protein
Thexy_1262 nuclease SbcCD, D subunit
Thexy_0303 DNA repair protein RadA
Thexy_0004 DNA replication and repair protein recF
Thexy_1377 ATP-dependent DNA helicase RecG
Thexy_1496 DNA repair protein recO
Thexy_0048 Recombination protein recR
Thexy_1194 DNA repair protein RecN
Thexy_2350 CRISPR-associated protein Cas1
Thexy_2274 CRISPR-associated protein Cas1
Thexy_0580 Ku protein
Thexy_0579 ATP dependent DNA ligase
Thexy_0009 DNA gyrase, A subunit
Thexy_0008 DNA topoisomerase IV, B subunit
Thexy_1339 DNA topoisomerase I
Thexy_0221 histone family protein DNA-binding protein
Thexy_0972 DEAD/DEAH box helicase domain protein
Thexy_2115 DNA polymerase IV
Thexy_1251 SOS-response transcriptional repressor, LexA
Thexy_1266 Regulatory protein recX
Thexy_0602 PHP domain protein
Thexy_1764 DEAD/DEAH box helicase domain protein
Thexy_0288 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Thexy_1284 phosphoesterase RecJ domain protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:txy03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Thermoanaerobacterium xylanolyticum