| |
KO |
 Eukaryotic type
|
|
|
 Prokaryotic type
|
SSBR (single strand breaks repair)
|
DSBR (double strand breaks repair)
|
HR (homologous recombination)
|
RecBC pathway proteins
|
RecFOR pathway proteins
|
 YPTS_0859 recA protein
YPTS_0609 DNA repair protein RadA
YPTS_0003 DNA replication and repair protein RecF
YPTS_0034 ATP-dependent DNA helicase RecG
YPTS_3296 single-stranded-DNA-specific exonuclease RecJ
YPTS_2999 DNA repair protein RecO
YPTS_1037 recombination protein RecR
YPTS_1216 DNA repair protein RecN
YPTS_0954 putative exonuclease RdgC
YPTS_2099 Holliday junction DNA helicase RuvA
YPTS_2100 Holliday junction DNA helicase RuvB
YPTS_2098 crossover junction endodeoxyribonuclease RuvC
|
K03553 recA; recombination protein RecA
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
|
AddAB pathway proteins
|
Other HR factor
|
Archaeal homologous recombinant proteins
|
NHEJ (non-homologous end-joining)
|
Two-component NHEJ DNA repair complex
|
SHIIR (short-homology-independent illegitimate recombination)
|
SHDIR (short-homology-dependent illegitimate recombination)
|
RecET pathway
|
YPTS_3296 single-stranded-DNA-specific exonuclease RecJ
YPTS_2999 DNA repair protein RecO
YPTS_1037 recombination protein RecR
YPTS_0039 NAD-dependent DNA ligase adenylation
YPTS_2811 DNA ligase, NAD-dependent
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
|
Facilitator
|
Supressor
|
TLS (translesion DNA synthesis) factors
|
Other factors with a suspected DNA repair function
|
DNA Repair and Recombination Proteins - Yersinia pseudotuberculosis PB1/+ (serotype 1B)