KCF-S cluster No. 97 (47 metabolites)

Corresponding Phytochemical cluster No. 59

• Index
• Plant Species
• KEGG BRITE br08003
• Metabolite list (47)
• Human Protein
  / Gene in interactions
• Related Diseases

Plant Species

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Cumulative plant class count

class name	count
rosids	28
asterids	15
Viridiplantae	4
Liliopsida	3

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Cumulative family count (Top 20)

class name	count
Rhodobacteraceae	20
Enterobacteriaceae	15
Fabaceae	13
Hyphomicrobiaceae	10
Solanaceae	9
Myxococcaceae	7
Flavobacteriaceae	7
Rhizobiaceae	5
Streptomycetaceae	5
Chromatiaceae	5
Myrtaceae	5
Corynebacteriaceae	4
Sordariaceae	4
Scenedesmaceae	4
Passifloraceae	4
Brassicaceae	3
Nostocaceae	3
Coccinellidae	3
Rhodospirillaceae	3
Bradyrhizobiaceae	2

KEGG BRITE br08003

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Categories (1)

br08003 Category	# of metabolite
Carotenoids	4

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metabolites link (4)

br08003 Category	KEGG ID	KNApSAcK ID
Carotenoids	C05432	C00000911
Carotenoids	C05414	C00000913
Carotenoids	C05430	C00000934
Carotenoids	C08603	C00003778

Metabolite list (47)

KNApSAcK ID	name	ChEMBL link	CTD link	# of proteins in ChEMBL interaction / related OMIM / related KEGG DISEASE	# of genes in CTD interaction / related diseases	figure
C00000906	7,8,11,12-Tetrahydrolycopene
C00000909	Prolycopene	CHEMBL501174 CHEMBL1984187		6 / 13 / 13
C00000911	Lycopene / all-trans-Lycopene	CHEMBL501174 CHEMBL1984187	C015329	6 / 13 / 13	84 / 13
C00000912	Neurosporene		C008604
C00000913	Phytofluene
C00000914	Spheroidenone		C104880
C00000923	Demethylspheroidene
C00000924	Demethylspheroidenone
C00000927	Chloroxanthin / Hydroxyneurosporene
C00000928	Methoxyneurosporene / 3,4-Dihydrospheroidene
C00000930	Spheroidene		C005637
C00000934	zeta-Carotene
C00003778	Lycoxanthin
C00007592	7,9,9'-tri-cis-Neurosporene
C00022807	beta-Zeacarotene / 7',8'-Dihydro-beta,psi-carotene
C00022808	7',8',11',12'-Tetrahydro-gamma-carotene
C00022822	3,4-Didehydrolycopene / 3,4-Didehydro-psi,psi-carotene
C00022823	3,4-Didehydro-1,2-dihydro-psi,psi-carotene
C00022824	1,2-Dihydrolycopene
C00022825	1,2,7,8-Tetrahydro-phi,phi-carotene
C00022826	1,1',2,2'-Tetrahydro-psi,psi-carotene
C00022827	1',2',7',8',11',12'-Hexahydrolycopene
C00022828	1,2,1',2'-Tetrahydroneurosporene
C00022829	1',2',7,7',8,8'-Hexahydrolycopene
C00022844	3-Hydroxy-beta-zeacarotene / 7',8'-Dihydro-beta,psi-caroten-3-ol
C00022852	Anhydrorhodovibrin / 3,4-Didehydro-1,2-dihydro-1-methoxy-psi,psi-carotene
C00022854	Rhodopin / 1,2-Dihydro-1-hydroxy-psi,psi-carotene		C113102
C00022856	11',12'-Dihydrospheroidene / 3,4-Didehydro-1,2,7',8',11',12'-hexahydro-1-methoxy-psi,psi-carotene
C00022857	3,4,11',12'-Tetrahydrospheroidene / 1,2,7',8',11',12'-Hexahydro-1-methoxy-psi,psi-carotene
C00022859	Lycopen-20-ol / psi,psi-Caroten-20-ol
C00022889	Rhodopinol / 13-cis-1,2-Dihydro-1,20-dihydroxy-psi,psi-carotene
C00022905	Lycophyll / psi,psi-Carotene-16,16'-diol
C00022937	Lycopene 1,2-epoxide / 1,2-Epoxy-1,2-dihydro-psi,psi-carotene
C00022938	1,2-Epoxy-1,2,7,7',8,8'-hexahydro-psi,psi-carotene
C00022958	Lycopen-20-al / psi,psi-Caroten-20-al
C00022959	3,4-Didehydro-1,2-dihydrolycopen-20-al / 3,4-Didehydro-1,2-dihydro-psi,psi-caroten-20-al
C00022962	cis-Rhodopin-20-al / 1,2-Dihydro-1-hydroxy-psi,psi-caroten-20-al
C00022963	Methoxylycopenal / 1-Methoxy-1,2-dihydro-psi,psi-caroten-20-al
C00023076	Nonaprene / 2-(3-Methyl-2-butenyl)-epsilon,psi-carotene
C00023077	11',12'-Dehydrononaprenoxanthin
C00023078	Nonaprenoxanthin
C00023079	2-Isopentenyl-3,4-dehydrorhodopin
C00023080	Nonaflavuxanthin
C00023097	Flavuxanthin
C00023251	(9Z)-Lycopene	CHEMBL501174 CHEMBL1984187		6 / 13 / 13
C00023252	(13Z)-Lycopene	CHEMBL501174 CHEMBL1984187		6 / 13 / 13
C00023253	(15Z)-Lycopene	CHEMBL501174 CHEMBL1984187		6 / 13 / 13

Human Protein / Gene in interactions

6 ChEMBL Protein in interactions

accession	description	class description	KNApSAcK metabolite in interactions	# of diseases (OMIM / KEGG)
P02545	Prelamin-A/C	Unclassified protein	C00000909 C00000911 C00023251 C00023252 C00023253	11 / 10
P11473	Vitamin D3 receptor	NR1I1	C00000909 C00000911 C00023251 C00023252 C00023253	2 / 3
O75496	Geminin	Unclassified protein	C00000909 C00000911 C00023251 C00023252 C00023253	0 / 0
O94782	Ubiquitin carboxyl-terminal hydrolase 1	Enzyme	C00000909 C00000911 C00023251 C00023252 C00023253	0 / 0
Q9UBT6	DNA polymerase kappa	Enzyme	C00000909 C00000911 C00023251 C00023252 C00023253	0 / 0
Q96KQ7	Histone-lysine N-methyltransferase EHMT2	Enzyme	C00000909 C00000911 C00023251 C00023252 C00023253	0 / 0

84 Gene in CTD interactions

gene	gene name	gene description	KNApSAcK metabolite in interactions
118	ADD1, ADDA	adducin 1 (alpha)	C00000911
177	AGER, RAGE	advanced glycosylation end product-specific receptor	C00000911
196	AHR, bHLHe76	aryl hydrocarbon receptor	C00000911
207	AKT1, AKT, CWS6, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA	v-akt murine thymoma viral oncogene homolog 1 (EC:2.7.11.1)	C00000911
367	AR, AIS, DHTR, HUMARA, HYSP1, KD, NR3C4, SBMA, SMAX1, TFM	androgen receptor	C00000911
571	BACH1, BACH-1	BTB and CNC homology 1, basic leucine zipper transcription factor 1	C00000911
8314	BAP1, HUCEP-13, UCHL2	BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) (EC:3.4.19.12)	C00000911
673	BRAF, B-RAF1, BRAF1, NS7, RAFB1	v-raf murine sarcoma viral oncogene homolog B (EC:2.7.11.1)	C00000911
841	CASP8, ALPS2B, CAP4, Casp-8, FLICE, MACH, MCH5	caspase 8, apoptosis-related cysteine peptidase (EC:3.4.22.61)	C00000911
847	CAT	catalase (EC:1.11.1.6)	C00000911
595	CCND1, BCL1, D11S287E, PRAD1, U21B31	cyclin D1	C00000911
898	CCNE1, CCNE	cyclin E1	C00000911
983	CDK1, CDC2, CDC28A, P34CDC2	cyclin-dependent kinase 1 (EC:2.7.11.23 2.7.11.22)	C00000911
1019	CDK4, CMM3, PSK-J3	cyclin-dependent kinase 4 (EC:2.7.11.22)	C00000911
1020	CDK5, PSSALRE	cyclin-dependent kinase 5 (EC:2.7.11.22)	C00000911
1022	CDK7, CAK1, CDKN7, HCAK, MO15, STK1, p39MO15	cyclin-dependent kinase 7 (EC:2.7.11.23 2.7.11.22)	C00000911
1025	CDK9, C-2k, CDC2L4, CTK1, PITALRE, TAK	cyclin-dependent kinase 9 (EC:2.7.11.23 2.7.11.22)	C00000911
1026	CDKN1A, CAP20, CDKN1, CIP1, MDA-6, P21, SDI1, WAF1, p21CIP1	cyclin-dependent kinase inhibitor 1A (p21, Cip1)	C00000911
1113	CHGA, CGA	chromogranin A (parathyroid secretory protein 1)	C00000911
1114	CHGB, SCG1	chromogranin B (secretogranin 1)	C00000911
23418	CRB1, LCA8, RP12	crumbs homolog 1 (Drosophila)	C00000911
1576	CYP3A4, CP33, CP34, CYP3A, CYP3A3, CYPIIIA3, CYPIIIA4, HLP, NF-25, P450C3, P450PCN1	cytochrome P450, family 3, subfamily A, polypeptide 4 (EC:1.14.13.67 1.14.13.97 1.14.13.32 1.14.13.157)	C00000911
1643	DDB2, DDBB, UV-DDB2	damage-specific DNA binding protein 2, 48kDa	C00000911
1981	EIF4G1, EIF-4G1, EIF4F, EIF4G, EIF4GI, P220, PARK18	eukaryotic translation initiation factor 4 gamma, 1	C00000911
2099	ESR1, ER, ESR, ESRA, ESTRR, Era, NR3A1	estrogen receptor 1	C00000911
2100	ESR2, ER-BETA, ESR-BETA, ESRB, ESTRB, Erb, NR3A2	estrogen receptor 2 (ER beta)	C00000911
2176	FANCC, FA3, FAC, FACC	Fanconi anemia, complementation group C	C00000911
2188	FANCF, FAF	Fanconi anemia, complementation group F	C00000911
356	FASLG, ALPS1B, APT1LG1, APTL, CD178, CD95-L, CD95L, FASL, TNFSF6	Fas ligand (TNF superfamily, member 6)	C00000911
2353	FOS, AP-1, C-FOS, p55	FBJ murine osteosarcoma viral oncogene homolog	C00000911
2701	GJA4, CX37	gap junction protein, alpha 4, 37kDa	C00000911
2702	GJA5, ATFB11, CX40	gap junction protein, alpha 5, 40kDa	C00000911
2879	GPX4, GPx-4, GSHPx-4, MCSP, PHGPx, snGPx, snPHGPx	glutathione peroxidase 4 (EC:1.11.1.12)	C00000911
3146	HMGB1, HMG1, HMG3, SBP-1	high mobility group box 1	C00000911
3383	ICAM1, BB2, CD54, P3.58	intercellular adhesion molecule 1	C00000911
3479	IGF1, IGF-I, IGF1A, IGFI	insulin-like growth factor 1 (somatomedin C)	C00000911
3480	IGF1R, CD221, IGFIR, IGFR, JTK13	insulin-like growth factor 1 receptor (EC:2.7.10.1)	C00000911
3485	IGFBP2, IBP2, IGF-BP53	insulin-like growth factor binding protein 2, 36kDa	C00000911
3713	IVL	involucrin	C00000911
3716	JAK1, JAK1A, JAK1B, JTK3	Janus kinase 1 (EC:2.7.10.2)	C00000911
3725	JUN, AP-1, AP1, c-Jun	jun proto-oncogene	C00000911
3796	KIF2A, CDCBM3, HK2, KIF2	kinesin heavy chain member 2A	C00000911
3838	KPNA2, IPOA1, QIP2, RCH1, SRP1alpha	karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	C00000911
3949	LDLR, FH, FHC, LDLCQ2	low density lipoprotein receptor	C00000911
3988	LIPA, CESD, LAL	lipase A, lysosomal acid, cholesterol esterase (EC:3.1.1.13)	C00000911
5604	MAP2K1, CFC3, MAPKK1, MEK1, MKK1, PRKMK1	mitogen-activated protein kinase kinase 1 (EC:2.7.12.2)	C00000911
5605	MAP2K2, CFC4, MAPKK2, MEK2, MKK2, PRKMK2	mitogen-activated protein kinase kinase 2 (EC:2.7.12.2)	C00000911
6416	MAP2K4, JNKK, JNKK1, MAPKK4, MEK4, MKK4, PRKMK4, SAPKK-1, SAPKK1, SEK1, SERK1, SKK1	mitogen-activated protein kinase kinase 4 (EC:2.7.12.2)	C00000911
5608	MAP2K6, MAPKK6, MEK6, MKK6, PRKMK6, SAPKK-3, SAPKK3	mitogen-activated protein kinase kinase 6 (EC:2.7.12.2)	C00000911
1432	MAPK14, CSBP, CSBP1, CSBP2, CSPB1, EXIP, Mxi2, PRKM14, PRKM15, RK, SAPK2A, p38, p38ALPHA	mitogen-activated protein kinase 14 (EC:2.7.11.24)	C00000911
5595	MAPK3, ERK-1, ERK1, ERT2, HS44KDAP, HUMKER1A, P44ERK1, P44MAPK, PRKM3, p44-ERK1, p44-MAPK	mitogen-activated protein kinase 3 (EC:2.7.11.24)	C00000911
5599	MAPK8, JNK, JNK-46, JNK1, JNK1A2, JNK21B1/2, PRKM8, SAPK1, SAPK1c	mitogen-activated protein kinase 8 (EC:2.7.11.24)	C00000911
4247	MGAT2, CDG2A, CDGS2, GLCNACTII, GNT-II, GNT2	mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (EC:2.4.1.143)	C00000911
100507436	MICA, MIC-A, PERB11.1	MHC class I polypeptide-related sequence A	C00000911
4292	MLH1, COCA2, FCC2, HNPCC, HNPCC2, hMLH1	mutL homolog 1	C00000911
4436	MSH2, COCA1, FCC1, HNPCC, HNPCC1, LCFS2	mutS homolog 2	C00000911
2956	MSH6, GTBP, GTMBP, HNPCC5, HSAP, p160	mutS homolog 6	C00000911
4842	NOS1, IHPS1, N-NOS, NC-NOS, NOS, bNOS, nNOS	nitric oxide synthase 1 (neuronal) (EC:1.14.13.39)	C00000911
8021	NUP214, CAIN, CAN, D9S46E, N214, p250	nucleoporin 214kDa	C00000911
5320	PLA2G2A, MOM1, PLA2, PLA2B, PLA2L, PLA2S, PLAS1, sPLA2	phospholipase A2, group IIA (platelets, synovial fluid) (EC:3.1.1.4)	C00000911
5591	PRKDC, DNA-PKcs, DNAPK, DNPK1, HYRC, HYRC1, XRCC7, p350	protein kinase, DNA-activated, catalytic polypeptide (EC:2.7.11.1)	C00000911
10111	RAD50, NBSLD, RAD502, hRad50	RAD50 homolog (S. cerevisiae)	C00000911
8045	RASSF7, C11orf13, HRAS1, HRC1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7	C00000911
5925	RB1, OSRC, RB, p105-Rb, pRb, pp110	retinoblastoma 1	C00000911
5962	RDX, DFNB24	radixin	C00000911
6195	RPS6KA1, HU-1, MAPKAPK1A, RSK, RSK1	ribosomal protein S6 kinase, 90kDa, polypeptide 1 (EC:2.7.11.1)	C00000911
6197	RPS6KA3, CLS, HU-3, ISPK-1, MAPKAPK1B, MRX19, RSK, RSK2, S6K-alpha3, p90-RSK2, pp90RSK2	ribosomal protein S6 kinase, 90kDa, polypeptide 3 (EC:2.7.11.1)	C00000911
6241	RRM2, R2, RR2, RR2M	ribonucleotide reductase M2 (EC:1.17.4.1)	C00000911
6401	SELE, CD62E, ELAM, ELAM1, ESEL, LECAM2	selectin E	C00000911
6414	SEPP1, SELP, SeP	selenoprotein P, plasma, 1	C00000911
4088	SMAD3, HSPC193, HsT17436, JV15-2, LDS1C, LDS3, MADH3	SMAD family member 3	C00000911
8243	SMC1A, CDLS2, DXS423E, SB1.8, SMC1, SMC1L1, SMC1alpha, SMCB	structural maintenance of chromosomes 1A	C00000911
6774	STAT3, APRF, HIES	signal transducer and activator of transcription 3 (acute-phase response factor)	C00000911
7031	TFF1, BCEI, D21S21, HP1.A, HPS2, pNR-2, pS2	trefoil factor 1	C00000911
7980	TFPI2, PP5, REF1, TFPI-2	tissue factor pathway inhibitor 2	C00000911
7039	TGFA, TFGA	transforming growth factor, alpha	C00000911
7097	TLR2, CD282, TIL4	toll-like receptor 2	C00000911
7099	TLR4, ARMD10, CD284, TLR-4, TOLL	toll-like receptor 4	C00000911
7124	TNF, DIF, TNF-alpha, TNFA, TNFSF2	tumor necrosis factor	C00000911
7157	TP53, BCC7, LFS1, P53, TRP53	tumor protein p53	C00000911
7412	VCAM1, CD106, INCAM-100	vascular cell adhesion molecule 1	C00000911
7415	VCP, ALS14, IBMPFD, IBMPFD1, TERA, p97	valosin containing protein (EC:3.6.4.6)	C00000911
7485	WRB, CHD5	tryptophan rich basic protein	C00000911
7697	ZNF138, pHZ-32	zinc finger protein 138	C00000911

Related Diseases

Diseases related to proteins in ChEMBL interactions

Diseases related to CTD interactions