Berberis vulgaris L.
Species
KNApSAcK Entry
| Organism name | Berberis vulgaris L. |
|---|---|
| Genus | Berberis |
| Family | Berberidaceae |
| Kingdom | Plantae |
NCBI taxonomy
Entry
| Linked NCBI taxonomy name | Berberis |
|---|---|
| Linked NCBI taxonomy ID | 22774 |
| Linked level | genus |
Family
| Family in NCBI taxonomy | Berberidaceae |
|---|---|
| ID | 41773 |
Kingdom (Superkingdom)
| Kingdom (Superkingdom) in NCBI taxonomy | Viridiplantae |
|---|---|
| ID | 33090 |
Plant class
| Plant class | eudicotyledons |
|---|---|
| ID | 71240 |
Natural Activity
List (55)
| Species | Activity |
|---|---|
| Berberis vulgaris L. | Alterative |
| Berberis vulgaris L. | Amebicide |
| Berberis vulgaris L. | Antiacetylcholinesterase |
| Berberis vulgaris L. | Antialzheimeran |
| Berberis vulgaris L. | Antiamnesic |
| Berberis vulgaris L. | Antiarrhythmic |
| Berberis vulgaris L. | Antiarthritic |
| Berberis vulgaris L. | Antibacterial |
| Berberis vulgaris L. | Anticancer |
| Berberis vulgaris L. | Anticariogenic |
| Berberis vulgaris L. | Anticholinesterase |
| Berberis vulgaris L. | Anticonvulsant |
| Berberis vulgaris L. | Antiemetic |
| Berberis vulgaris L. | Antifibrillatory |
| Berberis vulgaris L. | Antihelicobacter |
| Berberis vulgaris L. | Antihemorrhagic |
| Berberis vulgaris L. | Antiinflammatory |
| Berberis vulgaris L. | Antiitch |
| Berberis vulgaris L. | Antimitotic |
| Berberis vulgaris L. | Antineoplastic |
| Berberis vulgaris L. | Antiperistaltic |
| Berberis vulgaris L. | Antipyretic |
| Berberis vulgaris L. | Antiscorbutic |
| Berberis vulgaris L. | Antiseptic |
| Berberis vulgaris L. | Antispasmodic |
| Berberis vulgaris L. | Antitrypanosomic |
| Berberis vulgaris L. | Antitubercular |
| Berberis vulgaris L. | Antiulcer |
| Berberis vulgaris L. | Aperitif |
| Berberis vulgaris L. | Astringent |
| Berberis vulgaris L. | Bitter |
| Berberis vulgaris L. | Cholagogue |
| Berberis vulgaris L. | Choleretic |
| Berberis vulgaris L. | Collyrium |
| Berberis vulgaris L. | Depurative |
| Berberis vulgaris L. | Diaphoretic |
| Berberis vulgaris L. | Diuretic |
| Berberis vulgaris L. | Expectorant |
| Berberis vulgaris L. | Fungicide |
| Berberis vulgaris L. | Hematigenic |
| Berberis vulgaris L. | Hepatotonic |
| Berberis vulgaris L. | Hypotensive |
| Berberis vulgaris L. | Immunostimulant |
| Berberis vulgaris L. | Laxative |
| Berberis vulgaris L. | Leucocytogenic |
| Berberis vulgaris L. | Mydriatic |
| Berberis vulgaris L. | Negative Inotropic |
| Berberis vulgaris L. | Parasiticide |
| Berberis vulgaris L. | Peristaltic |
| Berberis vulgaris L. | Positive Inotropic |
| Berberis vulgaris L. | Sedative |
| Berberis vulgaris L. | Tonic |
| Berberis vulgaris L. | Tranquilizer |
| Berberis vulgaris L. | Uterotonic |
| Berberis vulgaris L. | Vasoconstrictor |
Metabolite list (1)
| KNApSAcK ID | name | ChEMBL link | CTD link |
# of proteins in
ChEMBL interaction / related OMIM / related KEGG DISEASE |
# of genes in
CTD interaction / related diseases |
KCF-S
cluster |
phytochemical
cluster |
figure |
|---|---|---|---|---|---|---|---|---|
C00024667
|
Columbamine
/ Dehydroisocorypalmine |
CHEMBL400345
|
C055786
|
1 / 0 / 1 | 8 / 1 | No. 155 | No. 4 |
|
Human Protein / Gene in interactions
1 ChEMBL Protein in interactions
| accession | description | class description | KNApSAcK metabolite in interactions |
# of diseases
(OMIM / KEGG) |
|---|---|---|---|---|
| P08684 | Cytochrome P450 3A4 | Cytochrome P450 3A4 | C00024667 | 0 / 1 |
8 Gene in CTD interactions
| gene | gene name | gene description | KNApSAcK metabolite in interactions |
|---|---|---|---|
| 1003 | CDH5, 7B4, CD144 | cadherin 5, type 2 (vascular endothelium) |
C00024667
|
| 1021 | CDK6, PLSTIRE | cyclin-dependent kinase 6 (EC:2.7.11.22) |
C00024667
|
| 1437 | CSF2, GMCSF | colony stimulating factor 2 (granulocyte-macrophage) |
C00024667
|
| 2048 | EPHB2, CAPB, DRT, EK5, EPHT3, ERK, Hek5, PCBC, Tyro5 | EPH receptor B2 (EC:2.7.10.1) |
C00024667
|
| 9500 | MAGED1, DLXIN-1, NRAGE | melanoma antigen family D, 1 |
C00024667
|
| 4313 | MMP2, CLG4, CLG4A, MMP-II, MONA, TBE-1 | matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) (EC:3.4.24.24) |
C00024667
|
| 64321 | SOX17, VUR3 | SRY (sex determining region Y)-box 17 |
C00024667
|
| 6774 | STAT3, APRF, HIES | signal transducer and activator of transcription 3 (acute-phase response factor) |
C00024667
|