KEGG   Asaia bogorensis: Asbog_02469
Entry
Asbog_02469       CDS       T04138                                 
Name
(GenBank) DNA/RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
abg  Asaia bogorensis
Pathway
abg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Asbog_02469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abg03019]
    Asbog_02469
   03009 Ribosome biogenesis [BR:abg03009]
    Asbog_02469
Enzymes [BR:abg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Asbog_02469
Messenger RNA biogenesis [BR:abg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Asbog_02469
Ribosome biogenesis [BR:abg03009]
 Prokaryotic type
  rRNA helicases
   Asbog_02469
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_22
Other DBs
NCBI-ProteinID: BAT20723
UniProt: A0A0P0YIX7
Position
2792182..2794020
AA seq 612 aa
MPFPDTVPSLSRALAARGYETPTAVQEAVLQPGLETRDLLVSAQTGSGKTVAFGLAFAPT
LIPEGSERLPPANSPLALVVAPTRELALQVQTELQWLYAETGARIVSCIGGTDARREARN
LSNGAHIVVGTPGRLCDHLSRGALNLSDLRVVVLDEADEMLDLGFRDELEQLLDAAPVER
RTLLFSATIAKEIANLARRFQKNAERINTVSTSKQHDDITYKCVLTAPNDIGRGVVNVLR
YYESPTAMLFCNTRAMVAQVQAALVERGFASVAISGEMGQNERSRAIEAVRSGVARVCVA
TDVAARGIDIPALSLVIHANMPSEAATLLHRSGRTGRAGRKGTCVVMVPVSQRRKAERLL
SFAKISNAEWESVPSADAILEQDAKRLMEDETLFAPSQANEDALASQLANAHDAHQLATA
LVRLYKSRLPSVESIRTVSVDAPARGMRDDRAPREFTGRVDRMGGEWFSLAIGRTERADP
KWLVPLICRLGGVTKSEIGAIHIDTDHTLFEIAPDSAERFRSCVAGADADEAKIEPASAP
TGPSAPPRGPRRPREGGFAPRGKGGFRGGDRGGDRGGDRGERGGDRGDRGDRPSFRKGNS
VGNGKGSSRKRY
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgccctttcccgataccgtaccgtctctaagccgcgctctggcggcacgcggttatgaa
acaccgaccgccgtgcaggaagccgttctgcagccaggccttgagacacgggatctcctc
gtttccgcacagacaggatcgggcaagacggttgctttcggtctcgcctttgccccgacc
ctcattcccgagggcagtgagcgtcttccgcctgccaacagcccgctcgctctggtggtt
gccccaacgcgcgaactggccctgcaggtgcagaccgaacttcagtggctttatgccgag
accggtgcgcgtatcgtcagctgcattggcggcacggatgcccgtcgcgaagcccgcaac
ctgtcgaacggtgcccatatcgttgtggggacgccgggccgcctgtgcgatcatctgtcg
cgcggtgccctgaacttgtccgatctgcgcgtggtcgtgctggacgaagccgacgagatg
ctcgatctgggctttcgcgacgagctggaacagcttctggatgccgcgcctgtcgaacgc
cgcacgctgcttttctcggcgaccatcgccaaggaaatcgccaatctggcgcgccgcttc
cagaagaacgccgagcgcatcaacacggtctccacgtccaagcagcatgatgacatcacg
tataaatgcgtgctgacagcgccgaatgacattggtcgcggtgtcgtcaacgtgctgcgt
tattacgagagcccgaccgccatgctgttctgcaacacccgcgccatggtcgcgcaggtg
caggcagcgctggtcgagcgtggttttgcctcggtcgccatctccggcgaaatgggccag
aacgagcgttcacgcgccatcgaagccgtgcgttcgggtgtggcacgcgtttgcgtggca
accgacgtggccgcacgtggcatcgacattccggcactttcactcgtgatccatgccaat
atgccgagcgaagcagcaacattgctgcaccgttcgggccgtacgggccgtgcaggccgc
aagggcacctgcgtggtcatggtgcctgtcagccagcgtcgcaaggctgagcgcctgctc
tcctttgccaagatcagcaatgccgagtgggaaagcgtcccttcggcggatgccatcctt
gagcaggacgccaagcgcctgatggaagacgagacgcttttcgcgccgtcgcaggccaat
gaagatgccctggcatcgcagctggcaaatgcgcatgacgcgcatcagctcgcaacggcc
ctcgtgcgcctctacaagagccgcctgccgagcgtcgagtcgatccgtacggtcagcgtt
gacgcccctgcccgtggcatgcgcgacgatcgtgcaccccgcgaattcacaggccgggtg
gaccgtatgggcggtgagtggttcagcctcgccattggtcgcaccgaacgtgccgacccg
aaatggcttgtccccctcatctgccgcctgggtggtgtgaccaagagcgagatcggtgcg
atccatatcgacacggatcacacactcttcgagattgcccctgacagcgccgagcgtttc
cgctcctgcgttgccggtgccgatgcggatgaagccaagatcgagccggcttccgccccg
actggcccctctgccccaccgcgcggcccgcgccgcccgcgtgagggtggctttgctcct
cgcggcaagggcggcttccgcggtggtgaccgtggcggcgatcgcggtggcgacagaggt
gagcgtggtggtgacaggggtgatcgcggcgaccgcccttcattccgcaagggcaactcg
gtcggcaacggcaagggctcgtcgcgcaagcgctattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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