KEGG   Aspergillus fumigatus: AFUA_5G11620
Entry
AFUA_5G11620      CDS       T01017                                 
Name
(RefSeq) pre-mRNA splicing factor RNA helicase (Prp43)
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
afm  Aspergillus fumigatus
Pathway
afm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AFUA_5G11620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afm03041]
    AFUA_5G11620
   03009 Ribosome biogenesis [BR:afm03009]
    AFUA_5G11620
Enzymes [BR:afm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     AFUA_5G11620
Spliceosome [BR:afm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    AFUA_5G11620
 Complex B
    AFUA_5G11620
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    AFUA_5G11620
Ribosome biogenesis [BR:afm03009]
 Eukaryotic type
  90S particles
   Helicases
    AFUA_5G11620
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD HA2_N AAA_22 SRP54 AAA_19 Flavi_DEAD T2SSE ResIII AAA_7 nSTAND3 AAA_23
Other DBs
NCBI-GeneID: 3511206
NCBI-ProteinID: XP_753488
UniProt: Q4WVC6
Position
5:2986593..2989032
AA seq 767 aa
MVDSRSDSEDRSRAKRQKMDKSETDPRNNPYLAHMYADASTNGNSSSSGTNPAFAKLKRH
QTTAALAKEVEDGEINPLTGRPFSSKYFSILQTRRDLPVHQQRDEFLQLYQQSQILVFVG
ETGSGKTTQIPQFVLYDDLPQTQRKMVACTQPRRVAAMSVAQRVAAELDVKLGEEVGYSI
RFEDMTSSKTCLKYMTDGMLLREAMHDHDLTRYSTIILDEAHERTMATDVLMGLLKEVVQ
RRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQ
IHATEPEGDILLFLTGEEEIEDAARKISLEADEMVREADAGPLKVYPLYGSLPPHMQQRI
FEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVS
PISKASAQQRAGRAGRTRPGKCFRLYTEGAFKTELIDQTYPEILRSNLSSTVLELKKLGI
DDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSP
EFYCSNEILSITALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEA
QENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTPFEDKKYYENIRRALCAG
FFMQVAKKEPQGKSVYTTVKDNQNVLLHPSTVLGYDAEWVLYNEFVLTTKNYIRTVTAVK
PEWLLDIAPTYYDISTFPKGEIRSSLLRAAERLSRKEKMRADSAKRR
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggtcgattcacgctcagactctgaagatcgctcgcgtgctaagcgccagaagatggac
aagtcagagacggatcccaggaacaatccttacctggctcatatgtatgcggatgcgtct
accaacggcaactctagctcgtcagggacgaatcctgctttcgcgaagttgaagagacat
cagacgacagcggcacttgcaaaggaagtagaggatggggagattaatcctcttaccggc
cgacctttctccagcaagtacttctctatcttgcagactcgtcgtgatcttccagtgcac
caacagagggatgagtttctgcagctttaccagcagtcccagatcctagtctttgtcggt
gagactggctccggaaagactacacagatccctcagttcgtcttgtacgatgatttaccg
caaacccagcgcaagatggtcgcttgtactcaacctcgtcgagttgctgccatgtccgtt
gcgcagcgtgtggctgctgaattggatgttaagcttggagaggaagttggttacagtatc
cgtttcgaggacatgacaagttccaagacctgcttgaaatatatgacggatggtatgctt
ctgagagaagctatgcatgatcatgaccttacacgctacagcacaatcattcttgacgaa
gctcacgaaagaaccatggctaccgatgtgcttatgggtcttctcaaagaagttgtgcag
cgtcggcccgatttgaagattatcatcatgtccgccaccttggatgcacaaaagttccag
cgatatttcaacgacgctcctctacttgccgttcccggtcgtacccatcccgtcgagatc
ttctatactcccgaaccggaacaagattatgtagaagcagccattcgcacggtccttcaa
atccacgccacagagccagagggtgatatccttctgttcctgactggtgaggaagaaatc
gaagatgctgcgcgcaagatatcgcttgaggcggacgagatggtgagagaagccgacgct
ggtcccttgaaagtctatccgctttacggcagtctgcctccgcacatgcagcagcgtatc
ttcgagcccgctcctccccctcgcaggccaggcggtcgtcctggccgtaaggtgattgtt
tcaacaaacatcgcagaaacgtctcttaccatcgacggaatcgtgtacgtggtggatccg
ggattctcgaaacagaagatctacaacccccgaattcgggtcgagtcacttctcgtgtct
cccatctccaaggcttctgctcagcaaagagctggtcgtgcgggtcgtacgcgccccgga
aaatgcttccgtctatacacagagggtgccttcaagacggaattgattgatcagacctat
cccgaaattctccgatctaacctttcttcgaccgtgctagagttgaagaagttgggaatc
gatgatctggtacattttgacctgatggaccctccagcccccgagactctcatgagagct
ttggaagagttgaattatctggcttgccttgatgatgacggcaacctgacaccgctgggc
cgccttgcctccgagtttcctcttgaccccgcgcttgccgtcatgctgatcagctctccc
gagttctactgctcaaacgagatcctgtcaatcacagctctgctttcggttccccaaatt
ttcgtgaggccggcctcgcagagaaagcgcgccgacgagatgaagaatcttttcgctcat
cccgatggtgaccatctcactcttctgaacgcctatcatgccttcaagagtccagaagcc
caggagaatccaaagcagtggtgtcacgatcattttctctccctcagatctctccaatcg
gcagacaacgttcgtatgcagctcctgaggatcatggagcgcgaggagctggaaatgatc
tcgactccttttgaagacaagaaatactacgagaacatccggcgtgcgctgtgcgcggga
ttcttcatgcaggtcgcaaaaaaggaaccacagggaaagagtgtctatacgaccgtcaag
gacaaccagaatgtccttctgcatccgtcaaccgtcctcggctacgatgccgagtgggtc
ctttataacgaattcgtcctcaccactaagaattacattcggactgtgaccgccgtcaaa
cccgaatggctccttgatattgctcccacttactacgatatctcaaccttccccaagggc
gagatccgatcctccttgctgcgcgctgcagagagactgtcacgcaaagagaagatgcgc
gcagactctgcaaagagacgatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (28)   

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