KEGG   Acinetobacter indicus: CTZ23_13545Help
Entry
CTZ23_13545       CDS       T05342                                 

Gene name
recD
Definition
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
aid  Acinetobacter indicus
Pathway
aid03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CTZ23_13545 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aid03400]
    CTZ23_13545 (recD)
Enzymes [BR:aid01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CTZ23_13545 (recD)
DNA repair and recombination proteins [BR:aid03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CTZ23_13545 (recD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: AAA_30 AAA_19 UvrD_C_2 AAA_11 Helicase_RecD Viral_helicase1 SH3_13 UvrD-helicase DUF2075 PhoH AAA_22 ResIII Herpes_Helicase T2SSE Mg_chelatase PIF1 AAA UvrD_C
Motif
Other DBs
NCBI-ProteinID: AVH15198
UniProt: A0A2L2J685
Position
complement(2781149..2782924)
Genome map
AA seq 591 aa AA seqDB search
MDNQRTVLTATPETQTPAWFALWSNYLLQAPFFQAEKREDSAKIIAQLLEATLNGDSCIA
ASAEQVAALANLVGSGSEPGSVAPFIYDQQHLYLYRYWALESALAQQVARLKQQAVTAVD
VSDYLHLLEDQHQQQALKMTATTAFNLITGGPGTGKTYTLARIIAVLNQALPEIRIAMAA
PTGKAAQRMKEALQNSFDDPKIANLVSDDLKRLTPITIHRLLGLGNRQQPRFHARQPLPY
DLIVIDEASMLDLNLASMLFNAIAEQTRVILLGDAQQLASVDVGSVLADLQQVPALADNH
VHLVTSRRFKAGALIGEMARFIQQQTAEQPAAQILQQFAAQLVQPGELQAVTLTQDMADV
LQLEYLPDEAPDPIAGQGYYDKLMLGYQGYVHSLKQYLQADDPDAVVTQVVKAFDQYRIL
TAIRHGGLGLQQLNMQIEQRLLQQLALDVAKQGDWYVGRPVMMTYNDYQLGLSNGDIGLC
LQRLREGNRQFEVYFPSLDKWVPATRLPKNIETAFTLTIHKSQGSEFQHVAVVLDQAAQN
LLSKELIYTAITRAKSVVSLLADRQALVQALTVKTSRNSGVLEKVNEHLSL
NT seq 1776 nt NT seq  +upstreamnt  +downstreamnt
gtggacaaccagcggacagttttaacagcaacgcctgaaacccaaaccccggcatggttt
gcgctttggagtaactatcttttacaggcgcctttttttcaggcggaaaagcgagaagat
tccgctaaaatcatcgcgcagttgctggaggctactctcaatggtgacagctgtatagcc
gcttctgccgaacaggtggcagcgttggccaatctggtcggttccggttctgaaccgggt
tcggtggcgccgtttatttatgaccagcagcatttatacctgtaccgttattgggcgctg
gagtcggcgctggcacagcaggtggcacgcttaaaacagcaagctgttacggcggtagat
gtgtcggactatctgcatttattggaagaccagcaccagcagcaggcgctcaaaatgacc
gcgactaccgcttttaacctgattacgggcggcccgggtaccggtaaaacctatactttg
gcgcggattattgccgtgctaaaccaggccttgccggaaatccggattgccatggcggcc
ccgaccggaaaagccgcgcagcgtatgaaagaagcactgcagaattcctttgatgatccg
aaaattgccaatctggtcagtgacgatctcaaacgcctgaccccgattaccatccaccgg
cttttgggccttggcaaccggcagcagccacgttttcatgcccggcagcctttaccttat
gacctgattgtgattgatgaagcctccatgctggacctgaatctggccagtatgctgttc
aatgccattgctgaacagacccgggtgattttactgggagatgcgcagcagctggcgtcg
gtcgatgttggttcggtactggctgatttacagcaggtgccggcactggcagataatcat
gtgcatctggtcaccagtcgccgttttaaagccggtgccttaattggtgaaatggcccgc
tttattcagcagcaaacggctgaacagccggccgcgcaaatcttgcagcagtttgccgca
cagctggtgcagccgggcgaattacaggccgtaactttaacgcaggacatggccgatgta
ctgcaactggaatatttacccgatgaagccccggatcccatagccgggcagggctattat
gacaaactgatgctgggctatcagggctatgtgcacagcttaaaacagtatttacaggcc
gatgatccggacgcggtggtgacgcaggtggtgaaagcctttgaccagtaccggattctg
actgcaattcgtcatggtggcttaggcctgcaacagctgaatatgcagattgagcagcgt
ttgctgcagcaactggctctggatgtggccaagcagggcgactggtatgtcggccggccg
gtgatgatgacctataacgactatcagctcgggctgtccaacggtgatattggcctgtgc
ctgcaacgtctgcgtgagggcaaccggcagtttgaagtgtatttcccgagtctggataaa
tgggtgccagccacacgcttgccgaaaaatattgaaaccgcatttaccctgaccattcat
aaatctcaaggttcggagtttcagcatgtggcggtggtgctggatcaggccgctcagaat
ctgctgagcaaggaactgatctataccgccattacccgggccaaatctgtggtgagttta
ctggccgaccggcaggcgctggtacaggccttaaccgtgaaaaccagccgtaacagtggt
gtattagaaaaagtaaatgaacatttatcattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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