KEGG   Histoplasma mississippiense: HCAG_06242
Entry
HCAG_06242        CDS       T02229                                 
Name
(RefSeq) similar to DNA mismatch repair protein 6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
aje  Histoplasma mississippiense
Pathway
aje03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HCAG_06242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_06242
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     HCAG_06242
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_23 AAA_27 Glyco_hydro_99 AAA_21 AAA_29 DUF5740 Filament
Other DBs
NCBI-GeneID: 5444997
NCBI-ProteinID: XP_001538637
AA seq 1188 aa
MAEDSGQQKTPDARILKKSTPSTQNMKSQKSILGFFQKSSPSASAASPACRNDASQEPVS
SPAQRAASNQKSHKKPEPKLPRSLNTRRNKTVTSSGQSITRVPSSDATGYCEQDAEVEVS
TAVNGDGKTEASTESAADGGLVPCPSHLLTDLRYRLTMKELIEALSQLLVGTSSRRSLKR
RKTAAGSSDEDEFKNDTEFSDDDLDNFVVPDDSEDEVKPSKKRKRPSNTAVKISSSKPSP
IRDEEFDFELPDVSGGSALKWTYDPNDTEPRKPRPAVVRNIAPGEKKKAKAHMSEPEQRY
PWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKF
YELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALG
KEMREKQDKSNGTPVKQDKIIRRELSCVLTSGTLVDGSMLQDDMSTYCVAIKEALVNDLP
AFGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMSTKALRILKNNTG
PTTLWNYLKPCKEFCEADVTVRELDASNYFVSEEGDNIAAWPEALRQARDKEFVMSAFGA
LVQYLRMLKIERDLITIGNFTWYDPIKKATSLVLDGQTLINLEIFANSFDGGQEGTLFHL
LNRCITPFGKRLFKQWVCHPLMDTRKINARLDAVDALNADSSVQNQFSSQLTKMPDLERL
ISRVHAGRCKAQDFLHVLEGFEKIDYTMGLLKEIGSGEGAIGQLVASMPDLSGYLQYWKT
AFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKEVRKKLGSNAIVYRDNGK
EIYQLEVPIKIKNVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVASRF
YARFDENYSTWLAAVRTIAQLDCLISLAKASSALGYPSCRPVFVDDERSVLEFEELRHPC
MLPNVGDFIPNDVKLGGNTPNLNLLTGANAAGKSTILRMTCTAVIMAQIGCYVPCQSARL
TPVDRIMSRLGANDNIFASQSTFFVELSETKKILFEATPRSLVILDELGRGTSSYDGVAV
AQAVLHHVATHIGALGFFATHYHSLASEFEGHPEIAPRRMRIHVDEEERRVTFLYKLEEG
IAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKESVKRRKEVG
NT seq 3567 nt   +upstreamnt  +downstreamnt
atggcagaggacagtgggcagcaaaaaacgccagatgctcgtatccttaagaagtcaact
ccaagcacacagaatatgaaaagccaaaagtcaattctgggcttcttccaaaaatcttcc
ccgtcagcttctgccgcttctcctgcttgccggaacgatgctagccaggagccagtgtct
tcacctgctcagcgagcggcctcaaatcaaaaatcccacaagaagcctgaaccaaaatta
ccaagatcattgaatactagacgaaataaaactgtaaccagcagtgggcagagcataacc
cgagttccaagtagcgatgcaaccggatattgcgaacaggatgccgaggtggaggtttcc
accgcagtaaatggtgatgggaagacggaggcaagtactgagagtgcggccgatggtggt
ctagtgccttgcccatcacacctgctaacagacttacggtacagattgacgatgaaggag
ctgatcgaagctctgtcacagctactcgtcggaacatctagccgaagatcccttaagagg
agaaaaacagctgcagggtcaagcgacgaagacgaattcaagaatgataccgagttttct
gatgatgacttggacaatttcgttgtcccagatgactccgaggacgaagtgaaaccgtca
aaaaaacgcaagcggccctcaaacactgctgtcaaaatatcttcgtcaaaaccatcccca
atacgagatgaggagtttgactttgaacttccagatgttagtggtggttctgccctaaag
tggacttacgatcccaatgatacggagccacggaagccacgacctgctgttgtcaggaac
attgcaccaggagagaagaaaaaagcgaaggcgcatatgagtgaaccagagcaacggtat
ccctggcttgctaatatcactgatattgaccgaaatccccctggccatcccgactatgac
ccccggaccatttacatccctcctcttgcgtggaccaaattctcaccttttgaaaagcag
tactgggaaatcaagcaaaagttttgggacaccatcgtctttttcaagaagggtaaattt
tacgagctttacgaaaatgatgctactattgggcatcaactgtttgatctgaaactcacg
gaccgtgtgaatatgcgaatggttggcgttcctgaaatgagcttggatcattgggccaat
caatttgttgccaagggcttcaagatcgcgcgggtagatcaaagcgagtccgccttgggt
aaagaaatgcgagagaagcaagataaatccaatggcacaccagtgaagcaggacaaaatt
atcagacgtgaattgtcttgtgtcttgacttccggcactcttgtagatgggtcaatgctt
caagatgatatgtcaacatattgcgtggctatcaaggaggcgttagtcaacgacctcccg
gcattcggtattgcttttgttgatactgccaccggccagttctatttagcagagttcatt
gatgatgccgatatgacaaagtttgagacgtttgttgcccaaacccgaccccaagaatta
ctgctcgagaagtctgtcatgtctaccaaggctttgcggatcctgaaaaataacactgga
ccaactaccctctggaattatttaaaaccctgcaaggagttctgtgaagccgatgttact
gtccgggagcttgatgccagtaattattttgtttcggaagagggtgacaatatcgcggca
tggccagaagcactacgacaggcacgggacaaagaattcgtcatgtcagcatttggggcg
ctagtgcaatacttacggatgctgaaaattgaaagagatttgatcacaatcggaaatttc
acttggtatgacccgatcaaaaaggcaaccagtcttgtcctggatggtcaaactttgata
aaccttgagatattcgccaattcatttgacgggggccaagaaggaacactcttccacctc
ttgaatcgatgcattacgcctttcggtaaaagactattcaaacaatgggtttgccaccca
ttgatggatactaggaaaatcaatgcgcgacttgatgccgttgatgccttgaacgcagat
agcagcgtccagaaccaattttcatctcagctaacaaaaatgcctgatctcgagagactt
atttctcgggtccatgctggaagatgcaaagctcaggatttcctccatgttcttgaagga
ttcgagaaaatcgattacacaatgggcctcctaaaggaaatcggttccggggagggagcc
attggacaattagttgcttcaatgcctgatttgagtggttacttgcagtactggaaaact
gctttcgatcgtaccaaagctaaggactccggtattcttgttcctgaagctggtgtcgaa
gaagactttgatgcttcacatgataggatttctgaaatagaaagtgatctggatcaactt
ctgaaggaagttagaaagaagctgggttccaatgccatcgtttatcgggataacggaaaa
gaaatttatcaacttgaagtaccaatcaaaattaaaaacgtcccaaaggactgggaccaa
atgtccgcgaccaagcaggcgaaacgcttctatttccctgagctacgcagcttaattcgc
cagcttcaggaagcacaagaaactcatagccagattgtcaaagaggttgcgagtcggttt
tatgctcgattcgacgagaattattcgacctggctagcagctgtgagaaccattgcgcaa
cttgattgtttgattagtttagcaaaagcctcatcagctttaggatacccaagctgtcgc
ccagtgtttgtggatgatgaacggagcgtcctagagttcgaagaacttagacatccatgt
atgttgccaaacgtgggcgactttatccccaatgatgtaaagctaggaggaaacacccca
aatctcaacttgctcactggtgctaacgctgctgggaaatccactatattacgcatgaca
tgtacagctgtaatcatggcacaaattggctgctacgttccctgtcaatctgctcgccta
acacctgttgatcgtatcatgtcccgtctcggcgccaatgacaatattttcgcgtcacag
tctactttttttgttgagctctcagaaactaaaaagattttattcgaagccacgcctcgc
tcccttgttattctggatgaattagggcgcgggacaagttcgtatgacggcgttgcggtg
gcccaggcagtgctccaccatgttgctacccacattggcgccctcggtttcttcgcaact
cattaccactccctcgcttctgaatttgaagggcatccagaaatagctccgcgacgaatg
cgcatccatgtggacgaagaagagagacgagttacattcctatacaagcttgaagagggc
attgcagaagggagcttcggcatgcactgtgcttccatgtgcggcattccgaacaaagta
gttgagcgtgcagaaattgccgccaagcaatgggaacatacaagccgtttgaaagaaagc
gttaagcgtaggaaggaggtgggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (40)   

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