KEGG   Acinetobacter lactucae: OTEC02_16975
Entry
OTEC02_16975      CDS       T05220                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
alc  Acinetobacter lactucae
Pathway
alc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OTEC02_16975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alc03400]
    OTEC02_16975
Enzymes [BR:alc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     OTEC02_16975
DNA repair and recombination proteins [BR:alc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OTEC02_16975
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 SH3_13 AAA_11 UvrD-helicase Viral_helicase1 Helicase_RecD ResIII SLFN-g3_helicase AAA_22 Herpes_Helicase PhoH DEAD nSTAND3 PIF1 AAA AAA_16 Flavi_DEAD AAA_28 ABC_tran DUF3136 AAA_24
Other DBs
NCBI-ProteinID: ARD30307
Position
complement(3577207..3578958)
AA seq 583 aa
MDNLNSPEQADLSWLTTWSNFLNQAPFTEQSQVPETTFYLQQLIEASLQGDSCIDVSSEQ
IAALGQLALSADQATSKVAPCVYDEQGLALYRYWHLEQRLAEQICRLKQQLIQPVSCDDY
LDLLTDPYQQAALQMVARQSLSIITGGPGTGKTYTLARIIAVLSQAIPHIRVAMAAPTGK
AAQRMQEALQNSFNDPKLLESGLVSEELRNQGTQTIHRLLGMGHSQTPRFNQKQPLPYDV
IVVDEASMLDLNLATLLFEAVPESCRIILLGDANQLASVDVGAVLADLQQIQALADNRVQ
LQTSRRFAEGALIGQVARFIQMQTSQINHEQVLQQFEIDIVQVSELRSIPLEVDMPDVVQ
LEYLPEGNHAEVKIYYQKLMLGFQGYVKSLKNYLKEERSIEQIQNVVKAFDDYRILTAVR
HGPFGLQQLNQYAQRWIQQQLSIVTLGGWYVGRPVMMTYNDYQLGISNGDIGLCFEHRTQ
PQQFEVYFPSLNKWVAANRLPKSIQSAFALTIHKSQGSEFTHTAVVLDQAAKNLLSQELI
YTAITRAKKVVSLLVHQEALLQAFTVRTTRKSGLVQKVNRLVR
NT seq 1752 nt   +upstreamnt  +downstreamnt
gtggacaatctaaatagccctgaacaagccgatttaagctggttaacaacttggagtaac
ttcttaaatcaggctccatttactgaacaatcgcaagtgccagaaaccactttttacttg
cagcagcttattgaagcgagcttacaaggcgatagctgtatcgatgtcagttcagagcaa
attgcagcacttggtcagcttgctctatctgccgatcaagcaacttcaaaagttgcgccg
tgcgtctacgatgagcaggggttggcattataccgatattggcacctagagcaacgactt
gcagaacaaatttgtcgattaaagcaacaattaattcaacctgtctcttgtgatgactat
ttagacctgcttaccgatccttatcaacaggcagctttacaaatggttgctcggcagagc
ctgagtattattacgggtgggccgggtacaggtaagacttatacgctggcacgtattatt
gctgtgctgagtcaagcaattccgcatattcgtgtggcgatggctgctccaactggtaag
gcagcacagcgaatgcaagaggctttacagaactcatttaacgatcctaaattgcttgag
tccggattagttagcgaagagctcagaaatcagggaacacaaacgattcaccgtttgttg
gggatgggacatagccagacaccacggtttaatcaaaaacagcctttgccttatgacgtg
attgtcgtcgatgaagcttccatgctggatttaaatctggctactcttttatttgaagct
gtgcctgagtcttgtcgaattattttattaggagatgcaaatcagcttgcttctgtcgat
gtcggcgcggttcttgcagatttgcagcaaatacaggcgttggctgataaccgagtacaa
ttacaaaccagtcgtcgttttgctgaaggtgcattgattgggcaggtggcacgttttatt
caaatgcaaaccagtcagattaatcatgagcaggttttgcaacagtttgaaatcgacatt
gttcaggtttcagaattacgttcaattcctttagaagttgatatgcccgatgtggttcag
cttgagtatttgccagaagggaatcacgcagaagtcaaaatttactatcagaagctcatg
ctcggtttccaagggtatgtaaaaagcctaaaaaattatttaaaagaagagcgctcgatt
gaacagatccaaaatgtagtaaaagcatttgatgactaccggattttaaccgcagttcgt
catggtccgtttggattgcagcagttaaatcaatatgcgcagcgttggatacagcaacaa
ctttcaatagtgactcttggtggatggtacgtgggtcgtcctgtaatgatgacttataac
gattatcagctcggtatttcaaatggtgatattggtttgtgttttgagcacagaactcag
ccacagcagtttgaagtatattttccaagtttgaacaaatgggttgctgcaaatcgatta
ccaaaaagtattcaaagtgcatttgccttaacaattcataaatcgcaagggtctgaattt
acccatactgctgtcgttttagatcaggctgccaagaacttattaagccaagaacttatt
tacactgcgattacacgagctaagaaagtagtcagtcttttagtgcatcaagaggcttta
ttacaagcatttacagttcgtactacacgaaaaagcggtttagttcaaaaagttaatcgg
ttagttcgttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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