KEGG   Austrofundulus limnaeus (annual killifish): 106514482
Entry
106514482         CDS       T06063                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34-like
  KO
K20804  E3 ubiquitin-protein ligase RNF34 [EC:2.3.2.31]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alim04121]
    106514482
Enzymes [BR:alim01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     106514482
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    106514482
SSDB
Motif
Pfam: FYVE_CARP1-2 ARMET_C PI3K_1B_p101 DUF4518 Autophagy_act_C FYVE Nop14 Radial_spoke CDC45 Sporozoite_P67 DNA_pol_phi Pes-10 CAC1F_C Paf1 Pex16
Other DBs
NCBI-GeneID: 106514482
NCBI-ProteinID: XP_013859226
UniProt: A0A2I4AUR6
Position
Unknown
AA seq 348 aa
MKAGASSMWASCCGLLNEVMGTGTVRAQQPGFGAGAGPFRFAPSTGYSTYPPTSSGSAGQ
LCKACGLAFSVFRRKHICCDCKKSFCALCSVLQENLRCCTTCHLLRGTAFQRHRLMQLRV
KDLRQYLLLRNIPTDTCREKEDLVDLVLCHQGARETSRPVMEEDEDEEEEEEEEKEDDDE
EDEAEDDTDSLHSLPHSRAASPPLATRSTSEQSVLSASQGDALSPSDSSGTTSQEHEETP
TVSLLNLEPTETLLEVSPATQRRIRASLSDLDNEAAIENLSVRQLKEILARNFVNYSGCC
EKWELLERVHRLYRENEQNRKSMENVSITAVVAYPPSLCNSGVGGKMW
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgaaggcgggggcctcgtccatgtgggcgtcatgctgcgggttgctgaatgaggtgatg
ggcacggggacggtgcgagcgcagcagccggggttcggagccggagcggggcccttccgc
ttcgcaccaagcacagggtactccacctacccccccaccagctcagggagcgcagggcag
ctgtgcaaggcctgcggtctggccttttctgtcttcagacgcaagcacatctgctgcgac
tgtaagaagagcttctgcgctctgtgctccgtgctgcaagaaaacctgcgctgctgcacg
acctgccacctgctgcgtggcaccgccttccagcggcatcgcctcatgcagctccgagtc
aaagacctgcggcagtacctgctgctgcgcaacatccccacagacacctgcagggagaag
gaggacctggtggacctggtgctctgccatcagggggcacgggagacctccaggcctgtg
atggaggaggacgaggacgaagaggaagaggaggaggaggagaaggaggatgacgacgag
gaagacgaagcggaggacgacacagacagtctgcactcgctcccccactcacgtgcggcg
tctccccccctggccacgcgctccacctctgagcagtcggtcctgtccgcctcgcaggga
gacgcgctcagcccgagtgacagttcagggaccaccagccaggagcacgaggaaactcca
acggtgtctcttctgaatctggagccgacagaaaccctcttagaggtcagcccggcgacg
cagaggaggatcagggcctcgctgtctgatctcgacaacgaggcggcgatagagaacctc
tctgtccgccagcttaaagagattctcgccaggaactttgtcaattactccggctgctgc
gagaagtgggagctgctggagcgcgtgcatcgactctacagggaaaacgaacagaacagg
aaatccatggaaaacgtgagcataactgcagtggttgcatatcctccgtctctttgcaac
agtggcgttggaggtaagatgtggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (26)   

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