KEGG   Alteromonas naphthalenivorans: ambt_20940
Entry
ambt_20940        CDS       T01513                                 
Name
(GenBank) hypothetical protein
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
alt  Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:alt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alt02044]
    ambt_20940
Secretion system [BR:alt02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   ambt_20940
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind T4SS-DNA_transf DUF87
Other DBs
NCBI-ProteinID: AEF05679
UniProt: F5Z716
Position
complement(4700730..4702595)
AA seq 621 aa
MLTYQRHLRRSPRYEMASSQIPVSRSVLFLGRGFRWTQTHTERLYAARDRRAEHYLQPSA
FKQWVRKKEIEWEHTPLLKQLVKLTARDSALNPVRPPPASGGDAVIHGVGIGGESNASMP
LSDRVGHMVVIARTRHGKTRLAELLITQDIHRRDNCVIVLDPKGDADLLKRIHIEAQRAK
RPLLIFHLGYPELSARYNAIGSFSRITEVATRIASQLPGEGDASAFKEFAWQFVNVIAVA
LVALGERPDFLKIRRYITDIDPLLIRYGHYWLDQHGNEQWQEELAEFRNAINVKSLPRVE
QGKDPDAIALVRYLKTQVEFDQVLEGLISAFRYDREYFQKITVAVKPFLEKLTTGNIAAI
LAPDLSDEQDQRPVLEWAHAIRDQAIVYVGLDALTDPEVASAVGESMFSDLTSLAGHIYK
HGIGDNPTQRNQKPPNIVIHGDEFSDLIGPQFKTLINKSGGAGYELNLYTQTWSDPIAEL
GSEAKAGQLAGNIGTVMIMGVKEIATCEMFTKQLPEVSVSEIMAVSGVTDNSEREGGISF
TSNNQDRVSISRVPMISPADIVALPKGQAFVLLKGSELWKIRIPMPSKVDDDELPDDLGE
MLRLMRQGYTSVTDWGSFNGR
NT seq 1866 nt   +upstreamnt  +downstreamnt
gtgttgacctaccagcgccacttacgccgaagtccccgttatgaaatggcttcctcgcaa
attcccgtgagccgttcggtcctgtttttaggccgcggttttcgttggacgcaaacccat
actgaacgcttgtatgccgcccgtgatcgacgtgccgagcattacctgcaacccagtgca
ttcaagcaatgggtacggaaaaaagaaattgagtgggaacatacgccgctgttaaaacag
ttggtaaagttgactgccagagattccgcgttaaatccagtgaggccaccgcccgccagt
ggcggcgatgctgtgattcatggtgtcggtattggcggggagagtaatgccagtatgccc
ttgtcggatcgtgtcgggcatatggtggtcattgctcgaactcgccacggcaaaacccga
ttggcggaactgctaatcacccaagacatccatcgccgagataactgtgtgattgtgtta
gaccccaagggcgatgcggatttgctcaagcgtattcatatcgaagcgcaacgtgccaag
cgtcccttgctcatcttccatttgggctaccccgaacttagcgctcgctataatgccatc
ggttcattctcacgtattaccgaagtggcaacacggattgccagtcagttaccgggagaa
ggcgatgccagtgcctttaaagaatttgcctggcagtttgtgaatgtgattgccgtagcc
ttggttgccttgggcgaacggcccgacttcctgaagattcgccgttatatcactgatatt
gacccgctactgattcgctatggccattactggttagatcaacacggtaatgaacaatgg
caggaggagttggctgaatttcgtaatgctatcaacgttaaatcactaccaagagtcgag
caaggtaaagatccggatgctattgcactggtacgttatctgaaaacacaggtggagttc
gaccaggtattggaaggcctgatttctgcctttcgctatgatcgggagtattttcagaaa
atcaccgtggcggtaaaaccgttcttggaaaagctgactaccggtaatatcgcagcgata
ctggcccccgatttatccgatgaacaggatcagcgccctgtgctggaatgggcgcacgcc
attcgtgatcaagcgattgtgtacgttggcctagatgctctaaccgatccagaagtcgca
agtgcagtcggagagtcgatgttcagtgaccttaccagtctggcggggcatatctataaa
cacggtatcggcgataatccaacacaacgaaaccagaaaccgccgaacatcgtgattcat
ggtgacgagttctccgatttaatcggccctcagttcaagacgctcatcaataaatccggt
ggtgcggggtatgagctgaatctctatacccaaacatggagtgaccccatcgcagagctg
ggcagtgaagctaaggccggacagcttgctggcaacatcggtacggtaatgattatgggg
gttaaggaaatagccacctgcgagatgttcaccaagcaactaccggaggtcagtgttagc
gaaattatggcggtatctggtgtcacggataatagtgaacgcgagggtggaataagtttc
acttctaataatcaggatcgggtaagcatcagtcgtgtacctatgatttctcctgcggat
attgtggccctacccaaaggtcaggcttttgtactactaaagggtagcgagctttggaaa
attcgcatccccatgccctcaaaagtagacgatgatgaactacccgatgacctgggtgaa
atgcttcgcttgatgcgccagggctatacttcagtcactgactggggcagttttaacggg
cgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system