KEGG   Aeromonas media: B224_2459
Entry
B224_2459         CDS       T03075                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
amed  Aeromonas media
Pathway
amed03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amed00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B224_2459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amed03019]
    B224_2459
Enzymes [BR:amed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B224_2459
Messenger RNA biogenesis [BR:amed03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B224_2459
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 Helicase_C_2 AAA_19
Other DBs
NCBI-ProteinID: AHX61055
Position
1945833..1947227
AA seq 464 aa
MSFNELGLSPHILRAVKELGYEQPTPIQQQAIPAILAGQDVLGGAQTGTGKTAGFTLPML
HRLLANHGRGGRRQVRALVLTPTRELAAQVGESIIKYAHHLPFRTLIAYGGVSIKPNLDA
IKLGVDILVATPGRLLDLLTQGALTLSALEVLVLDEADRMLDMGFITDIRRIMNALPEER
QTLLFSATFSNDIKALADDLLNDPTLIEVDPSNTAADQVTQRVIQVDRERRREMLSHMIG
RGNWQRVLVFVRTKQIADRLAQQMQKDGLNTVAIHGDKSQGARNRALADFREGKVRVLVA
TDIAARGLDIDQLPHVINFELPQMAEDYIHRIGRTGRAGRGGEAISLVSQDELGQLKDIE
ALIGQSLTVEIMEGYEPSGKPSRQTLPGSKPVQNPPRARGHANAKSNNAKGKPDAAKGKA
KGDGPKKPAPARKREVVGEDIGFTPMRRLPKAQRDDYQDNSSEE
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtcattcaatgaactgggtctgtcaccgcacatcctgcgggccgtcaaggagctgggt
tacgaacaacccacccccatccagcagcaagccatcccggccattctggccggtcaggac
gtgctgggcggtgcccagacagggacaggcaagacggccggtttcaccctgcccatgttg
caccgtctgctggccaaccacggccgtggtggccgccgtcaggttcgcgccctggtgctg
accccgacccgggagctcgccgcccaagtgggcgagagcatcatcaagtacgcccatcat
ctgccgttccgcaccctgatcgcctacggcggcgtcagcatcaagccgaacctggacgcc
atcaagctcggggtcgacatcctggtcgccaccccgggccgcctgctggatctgctgacc
cagggagcactcaccctgagcgctctggaagtgctggtgctggatgaagcggacagaatg
ctcgacatgggtttcatcaccgacattcgccgcatcatgaatgcgctgccggaagagcgt
cagacgctgctgttctccgccaccttctcaaacgacatcaaggcgctggcggacgatctg
ctcaatgaccccaccctgatcgaggtggatcccagcaacaccgccgccgatcaggtgacc
cagcgcgtcatccaggtcgaccgggaacgccgtcgcgagatgctctcccacatgatcggc
cgtggcaactggcagcgagtgctggtgttcgtgcgaaccaagcagatcgccgaccgcctc
gcccagcagatgcaaaaggatggcctcaatacggtcgccattcacggcgacaagagccag
ggtgcccgcaaccgggcgctggccgatttccgcgagggcaaggtgcgggtgctggtcgcc
accgacatcgccgcacgcggcctggacatcgatcagctgccccatgtgatcaacttcgag
ctgccccagatggcggaggattacatccaccgcatcggccgcaccggccgcgccggccgt
ggtggcgaagccatctccctggtgagccaggacgagctgggccagctcaaggatatcgag
gccctgatcggccaatccctgaccgtggagatcatggaagggtacgagccgagcggcaaa
ccgagccgccagaccctgccaggcagcaagccggtgcaaaacccgccccgtgcccgcggc
catgccaacgccaagagcaacaatgccaagggcaagcctgacgcggccaaaggcaaggcc
aaaggggacggccccaagaagccggccccagctcgcaagcgcgaggtcgtgggggaagac
atcggcttcacccccatgcgccgcctgcccaaggcccagcgcgacgactatcaggacaac
tccagcgaggagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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