KEGG   Arabidopsis thaliana (thale cress): AT5G22750
Entry
AT5G22750         CDS       T00041                                 
Symbol
RAD5
Name
(RefSeq) DNA/RNA helicase protein
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT5G22750 (RAD5)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    AT5G22750 (RAD5)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 ResIII zf-RING_5 zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 832338
NCBI-ProteinID: NP_197667
TAIR: AT5G22750
UniProt: Q9FNI6 A0A7G2F9F0
Position
5:complement(7565037..7571109)
AA seq 1029 aa
MGTKVSDDLVSTVRSVVGSDYSDMDIIRALHMANHDPTAAINIIFDTPSFAKPDVATPTP
SGSNGGKRVDSGLKGCTFGDSGSVGANHRVEEENESVNGGGEESVSGNEWWFVGCSELAG
LSTCKGRKLKSGDELVFTFPHSKGLKPETTPGKRGFGRGRPALRGASDIVRFSTKDSGEI
GRIPNEWARCLLPLVRDKKIRIEGSCKSAPEALSIMDTILLSVSVYINSSMFQKHSATSF
KTASNTAEESMFHPLPNLFRLLGLIPFKKAEFTPEDFYSKKRPLSSKDGSAIPTSLLQLN
KVKNMNQDANGDENEQCISDGDLDNIVGVGDSSGLKEMETPHTLLCELRPYQKQALHWMT
QLEKGNCTDEAATMLHPCWEAYCLADKRELVVYLNSFTGDATIHFPSTLQMARGGILADA
MGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRL
LEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVV
ITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCL
TGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRR
TKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYA
SILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREGKDVPSEAFVQ
EVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTVSKQ
ELITAPTESRFQVDVEKNWVESSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLS
RNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWW
NPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSAR
IEELKMLFT
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgggaacgaaagtctcagacgatcttgtttccaccgtcagatcagtcgtgggttccgat
tactcagatatggatataatcagggctttacacatggcgaatcatgatccaacggctgct
atcaatataatcttcgacactccaagtttcgccaaacctgatgtagccactcctaccccg
agcggctctaatggagggaagcgagttgatagtggattaaagggctgtacttttggtgac
agcggaagtgttggagcgaatcatcgcgtggaggaagaaaatgagagtgttaatggtgga
ggagaagagagtgtttcagggaatgagtggtggtttgttggttgttctgaattggctggg
ttatcgacatgtaaaggaaggaaattgaagtctggtgatgaattggtgttcacgtttccg
catagtaaaggattaaagcctgagactacgcctgggaagcgcggttttgggcggggaagg
ccagctttgcgtggtgcttctgatatcgttaggttctctacaaaggattcaggagagatt
ggtagaataccaaacgagtgggctcggtgtcttctaccacttgtgagagacaagaaaatt
aggatagaaggcagttgcaagtcggcgcctgaagctttgagcatcatggatacaattctt
ctgtctgtaagcgtgtacattaatagttccatgtttcaaaagcatagtgcgacttcattt
aagacagctagtaatacggcagaggaatcaatgttccatcctctcccaaatctctttcgg
ttactcggtttgatcccctttaagaaggcagagtttactccagaggatttttactctaag
aagcgacctttgagttccaaggatggttctgctattcctacttcgttgcttcaattaaac
aaggtcaagaatatgaatcaagatgcaaacggagatgaaaatgagcagtgtatcagcgat
ggtgatcttgataacattgttggtgttggggacagttctggattaaaggaaatggaaact
ccacatacacttctgtgtgagcttcgtccataccaaaagcaggcacttcattggatgacc
caactggagaaaggaaattgcactgatgaggcagcaacaatgcttcacccgtgttgggaa
gcatactgtttagcagacaagagggaactggttgtctacctgaattcttttactggtgat
gctacaatacacttccctagcacacttcaaatggcaagaggaggaatattagcagacgca
atgggtcttggaaagactgtaatgaccatatcccttttgcttgcccattcttggaaagct
gcatcaactgggtttctatgccccaactatgaaggagacaaagtgatcagcagttctgta
gatgatctcactagtcccccggtgaaggcaaccaaatttctaggctttgataagaggctt
cttgaacaaaaaagtgtacttcaaaatggtggtaacctgattgtatgtccgatgacactt
ttaggacagtggaagacagagattgaaatgcatgcaaagcctgggtctctatctgtctat
gttcactatgggcaaagcaggccgaaggatgcaaaacttctttcccagagtgatgtggta
atcaccacatatggagttctaacatccgaattctcgcaagagaactcagcagaccatgaa
ggaatttatgcagttcgatggtttaggattgttcttgacgaggcacataccatcaaaaac
tcaaaaagccaaatttccttggctgctgcagctctggttgctgataggcgttggtgtctt
acgggtactcctattcagaacaatctggaggatttatacagccttctacggtttttgagg
attgaaccatggggaacttgggcatggtggaataaacttgtccaaaagccatttgaagag
ggtgatgagagagggttaaagctagtgcagtctatcttaaaacctatcatgcttaggaga
acaaagtctagcacagaccgagaaggaaggccgattcttgttctaccccctgctgatgca
cgggtcatttactgtgaactttcggagtctgagagggatttctacgacgcgctatttaaa
agatccaaggtcaaatttgatcaatttgttgaacaaggcaaagttcttcataactatgct
tcgatcctggaactgcttttgcgtcttcgacaatgttgtgatcacccatttttagtaatg
agtcgaggggatacagcggaatactctgatctgaataagctttctaaacgtttccttagt
ggaaagtcttctggcttagaaagggaaggaaaagatgtaccgtcagaggcttttgttcag
gaggtggtagaggaactgcgcaaaggagagcaaggagagtgtccaatatgccttgaagca
cttgaggatgctgtattaacgccatgtgctcatagattatgtcgtgagtgtctcttggca
agttggagaaattctacttctgggttatgtcctgtgtgtaggaacactgtaagcaaacaa
gaactcatcacagcaccaaccgaaagtagattccaggttgacgtggaaaagaattgggtg
gaatcatcgaaaatcactgctcttctggaagagcttgaaggtcttcgttcttcaggctct
aagagcattctctttagccagtggaccgctttcctcgatctcctccaaattcccctctct
cggaataacttttcatttgtccgtcttgatggcacgctaagtcagcagcaacgagagaag
gtccttaaagaattttccgaagatggcagtatcctggtactgttgatgtctctaaaagct
ggtggcgttgggataaatctaacagctgcgtccaatgcttttgtcatggatccatggtgg
aacccagcggtagaggaacaagctgttatgcgtattcatcgtatagggcaaactaaggaa
gtcaaaatcagaagattcatcgttaagggaacggttgaagagagaatggaggcggttcag
gcgaggaagcagagaatgatctctggggctttaaccgatcaagaagtacgaagtgcacgt
atagaggaactcaagatgttatttacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (54)   

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