KEGG   Bacillus sp. YP1: QF06_15065
Entry
QF06_15065        CDS       T03701                                 
Name
(GenBank) helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bacy  Bacillus sp. YP1
Pathway
bacy03420  Nucleotide excision repair
bacy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bacy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QF06_15065
   03430 Mismatch repair
    QF06_15065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bacy03400]
    QF06_15065
Enzymes [BR:bacy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QF06_15065
DNA repair and recombination proteins [BR:bacy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QF06_15065
   MMR (mismatch excision repair)
    Other MMR factors
     QF06_15065
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 UvrD_C AAA_19 AAA_30 Viral_helicase1 SLFN-g3_helicase PhoH AAA_16 DEAD NACHT ResIII nSTAND3
Other DBs
NCBI-ProteinID: AJO59715
Position
complement(3047666..3049990)
AA seq 774 aa
MNQQDKEWKEEQSRIDEVLQELEKKERFLETSAGGLKHDIIGLRKSFWEDVKVNFDDAHE
AIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKSPYFGRIDFIENGEEQAERIYIG
LASCLDEKEEHFLIYDWRAPISSLYYNYSPGKAEYEVPGETIEGEMVLKRQFMIKNGTLK
AMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQNQIIRNEKSKILIVQGAAGSGKT
SAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENMEQATFQEYIEHR
LGRKFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYVTRLSSEGMIFK
NIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKKERRKDWVVHEA
ELLDKEDYLDVYKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLKQAVRLLAFLDV
SQLYLQLFSGWGGKFQHEKMAVIGELTRSAFTDNKLLYEDAAPFLYMQDLIEGRKKNTKI
KHLFIDEAQDYSPFQMAYMRSIFPAASMTVLGDINQSIYAHTIHGDQRMDACFEDDPAEY
VRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRSGEMPLVVKTEGHESLCQKLAQEIGRLK
KKGHETIAVICKTAQQCIQAHAHMSEYTDVRLIHKENQPFQKGVCVIPVYLAKGIEFDAV
LVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGEASPFVTAVPPHLYQIAE
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgaatcagcaggataaggaatggaaggaagagcagtcgagaatagatgaggtgctgcag
gagctcgaaaaaaaagagcggtttctggaaacgtctgcgggcgggttgaagcatgatatc
atcggattaagaaaaagcttttgggaggatgttaaggttaattttgatgatgcccatgaa
gcgattgaaacgatggcaagcattaagcagcaggcagagctgctgtctgatcgggaacac
aatcatcggcgcatggatcagcagctcaaacgaattcatcaattaaaaaaatcgccttat
ttcggccgaattgattttattgaaaacggcgaggagcaggcagagcgaatttatatcggt
ttagcttcctgtttggatgagaaggaggaacactttctgatttatgactggagggcgccg
atatcaagtttgtactacaattattccccaggtaaagcggagtacgaggtgcccggtgaa
acgatagaaggggaaatggtgctgaaacgccagtttatgatcaaaaacggcactctcaag
gcgatgtttaataccgatatgacgattggtgatgaaatgctgcaagaggtattaagccat
cactccgatacccaaatgaaaaacatcgtgtctacgattcagaaagaacaaaatcagatt
atccgtaatgaaaaaagcaagatcctgatcgtgcagggagcggctggcagcgggaaaaca
tcggctgcgcttcagcgtgtcgcttatttgttatacaggcaccgtggcgtcattgatgcc
ggacaaatcgttttgttttctcccaacttcttatttaacagctatgtctcctctgttttg
ccggagttaggagaagagaatatggagcaggcgacgtttcaggaatatatcgagcatcgt
cttggccgcaagttcaaatgtgaaagcccctttgatcagctcgaatattgcctgaccgaa
acaaagggaggcgattttccaacaaggcttgcgggaatcacatggaaggcgggtttatcc
tttcagcaattcattaatgaatacgtcacacggctttcctctgaagggatgatttttaaa
aatattatattccgcggacaaaagctgatcacaaaggagcaaattcaatcctatttttac
tcattggatcaaaatcactccattccgaatcggatggagcaaaccgcgaagtggctgctg
agtgagcttaacaagcttgagaaaaaggaacggcgaaaggattgggtcgttcatgaagct
gagctgcttgacaaagaggactacttggacgtgtacaaaaaactgcaggaaaggaaacgg
ttcagcgagagtacgtttaacgattatcaaagagagcagcagctgcttgccgccatcatt
gtgaaaaaagctttcaaaccgctcaagcaggcagtcaggctccttgcatttcttgatgtt
tcacagctgtatttgcaattgttttctggctggggagggaaatttcagcatgagaagatg
gccgtgataggtgagctgacccgttcggcatttacggataataaattgctctatgaggac
gcggcaccgtttctttatatgcaggatctgattgagggcagaaagaaaaatacgaagatc
aaacatctatttattgacgaagcccaggactattcaccgtttcagatggcttacatgaga
agcatttttccggctgccagcatgacagtgctcggtgatatcaatcagtccatctacgcg
cataccatacacggggatcagcgtatggatgcgtgctttgaggatgatcctgctgagtat
gttcgtttaaagagaacatacagatcaacaaggcagattgtcgagtttaccaaagcgatg
cttcaagatggagcggatattgagccgtttaatagaagcggggaaatgccgctcgttgtc
aaaactgaaggacatgagagcctttgccaaaagctcgcgcaagaaattggccggctcaag
aaaaaagggcacgaaacaatagccgtcatctgcaagactgcgcagcaatgcatacaggcg
cacgcccacatgagtgaatatacagatgttcgcctgattcataaagaaaatcaaccattc
caaaagggtgtttgcgtgattccggtgtatttagcgaagggaattgaatttgacgcagtg
cttgtctatgatgcatctgaagaacactatcatacagagcacgaccgcaggcttttatat
actgcgtgcacccgtgcgatgcacatgctggcggtattttatacaggtgaagccagtccg
tttgtaaccgctgtgccgcctcacttatatcagattgctgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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