KEGG   Niallia circulans: C2I06_11610
Entry
C2I06_11610       CDS       T06357                                 
Name
(GenBank) DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bcir  Niallia circulans
Pathway
bcir03420  Nucleotide excision repair
bcir03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C2I06_11610
   03430 Mismatch repair
    C2I06_11610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcir03400]
    C2I06_11610
Enzymes [BR:bcir01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C2I06_11610
DNA repair and recombination proteins [BR:bcir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C2I06_11610
   MMR (mismatch excision repair)
    Other MMR factors
     C2I06_11610
SSDB
Motif
Pfam: AAA_19 Viral_helicase1 UvrD-helicase UvrD_C UvrD_C_2 SLFN-g3_helicase AAA_11 DEAD AAA_30 AAA_14 ResIII NACHT nSTAND3
Other DBs
NCBI-ProteinID: AYV67475
UniProt: A0A268F8Z5
Position
complement(2389975..2392311)
AA seq 778 aa
MEKGETMEDFSIDEWEQEKKRLEYTKNYMNDVLHEAQINQGTLQENVRESISNEEALDSS
LSYINYLTNSKFLQLATTELSILKRILDAPYFARIDYQMKGKSQKNVYYLGKTSLFEKDT
QKPIIVDWRSPIANVYYDGRLGEVSYEVNEETIDGHLSLKRQFKIEKGELLHYQDIDLTT
TDELLQQSLAGKADQRLTEIISTIQAEQNEIIRADLNRPIIVQGAAGSGKTTIALHRISY
FIYNYAKYFQPEQLMIIAPNNMFIGYIAQALPDLGVEKIRQTTFLDYVLLCIGKKMKVIQ
SNKKLLTFINHTNKQEELVKWLSRYKGSLEYKKVMDKYLVDICNEMSPKEDFRVEKFPLY
GAKKLERLFKKEYDYLPLIKRKEKIKGILQADLKRKKKIILSKLEDKYEDALDRALKIKE
DTKRKEKVVYFLDTKAERLATVKKEASTAVRRYMKTMETTDLYGYYSRLFADKELLRKYT
EDSLTEKQLDYLIAFQRKILKQKKVEIEDLGALFYLQYKIFGIDKEYRAKNIVIDEVQDY
SEFQLYALKAGLETDMFTLVGDLAQGIHSYRGLQNWQTLQQTIFPRANYMTLQKSYRTTI
EIMFLANEILHLVNEDLPKVKPVVRHGEKPTVHLYEQKQELVDRMIQVADRLHNDGYHSI
AIIGKTEEECKAILKEMQKRKVPNVQFLQENEDLEKNYLIIVPSYLSKGLEFDAVLLFTL
NESFSQEEIDLKLLYVAMTRPMHRLHLFTRDKASLLLDKTHEAYFTVEKENERKSGER
NT seq 2337 nt   +upstreamnt  +downstreamnt
atggagaaaggggaaacaatggaagacttttcaatagacgaatgggaacaggaaaagaaa
agacttgaatatacgaaaaattatatgaatgacgttttgcatgaggcgcaaatcaatcaa
gggactttacaggaaaatgtgcgagaatccataagcaatgaagaggcgcttgacagtagt
ttgagttatatcaactatttaacgaatagtaagtttttgcagcttgcaacaaccgagtta
agtattttaaaacgtattttagatgctccctattttgcgcggattgattatcaaatgaaa
gggaagtcccaaaagaatgtctattatttaggaaagacatcgctttttgaaaaagacaca
caaaaaccaattatagtagactggcgttcaccaattgcaaatgtctattacgatggacga
ttgggagaagtttcatatgaagtcaatgaagaaacgattgatgggcatttatcgttaaaa
agacaatttaaaattgaaaaaggggagctccttcattatcaggatatagatttaacgacg
acagatgaattattgcagcaatctcttgctggaaaagcagaccaacgactaacagagatt
atttcaaccattcaagcagaacaaaatgaaataattcgagctgatttaaatcgaccgatc
attgtgcaaggagcggccggaagtggtaagacaactattgctttacaccgaatatcctat
tttatctataactatgcaaaatattttcaacctgagcaattaatgattattgcgccaaat
aatatgtttatcggatatattgcacaagcactgcctgatttgggcgtagagaagattcgc
caaacgacattcctagattatgttttactatgcattggcaagaaaatgaaagtaattcag
tcaaataaaaaactactaacatttataaatcatacgaacaaacaagaagaattggttaag
tggctttcccgttataaaggatctttagaatataaaaaggtaatggataaatatttagtg
gatatatgtaatgaaatgagtccaaaagaagattttcgggtagaaaaattcccgttatat
ggagcaaagaaactggagcgtttatttaagaaggaatacgattatcttcctttaatcaaa
cggaaagagaaaataaagggaatcttacaagctgatttaaaacggaaaaagaaaataatc
ttaagtaagttggaagataagtatgaagatgcattagatcgagccttaaagataaaagaa
gatacaaagcgtaaagagaaagttgtctattttctagacacgaaggcagaaagattagca
acagtaaagaaagaagcatcaactgctgttagaagatatatgaagacgatggaaacaacc
gatttatatgggtattattccagattatttgcggataaggagctccttagaaaatatacg
gaagattcgctaacagaaaagcaattagattatttgattgccttccagcgaaagatatta
aaacaaaagaaagtggaaatcgaggacttaggggcattattttatttgcagtataaaata
tttggcatagataaagaatatcgagcgaagaatattgtcattgatgaagtgcaggattat
agcgaatttcagctatatgccttaaaagcaggactagaaacagatatgtttacccttgtt
ggagatttagcacaagggattcactcctatcgaggattacagaactggcagacattacag
caaactatttttccgcgcgcgaattatatgaccttgcaaaaaagctaccggactacgatt
gaaattatgtttttggcaaatgaaattttgcatttagtcaatgaagatttgcccaaagta
aaaccagttgtccgccatggagaaaaaccaactgttcatttatatgagcaaaaacaagaa
ttggttgacagaatgattcaagtagcagatcgactgcataatgacggttatcactctatt
gctattattggtaaaacagaggaagaatgtaaagcaatattgaaagagatgcaaaaaaga
aaagtgcctaatgtccaatttcttcaagaaaatgaagatcttgaaaagaattatttaatt
attgtcccaagctacctttccaagggactggaatttgacgcagttcttctttttacgtta
aatgagtctttttcccaagaagaaatagatttaaagcttttatatgtagcaatgacaaga
ccaatgcatcgccttcatttatttacacgcgacaaagcatcgttattattggataagaca
catgaagcatattttacagtggagaaagaaaacgagcgaaagagtggggaaagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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