KEGG T04820: BGM20

Alkalicoccobacillus gibsonii: BGM20_11710

Entry

BGM20_11710       CDS       T04820

Name

(GenBank) excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

bgi Alkalicoccobacillus gibsonii

Pathway

bgi03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:bgi00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BGM20_11710
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgi03400]
    BGM20_11710
DNA repair and recombination proteins [BR:bgi03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BGM20_11710
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BGM20_11710

SSDB

Motif

Other DBs

NCBI-ProteinID:

AOL31250

Position

complement(2265934..2268807)

AA seq 957 aa
MAMDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKP
HCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIVSGRKGAHVKVLEQIRKQGYVRVR
IDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
EEELMFSEHHACPHCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDADLVIPNQDLS
LKENAVAPWTPISSQYYPQLLEAVCTHYGIDMDVPVKDLPKHQLDKVLYGSGDDLIYFRY
ENDFGQIREGEIQFEGVLRNIERRYKETGSDFIREQMEQYMSQKSCPTCKGYRLKKEALA
VLIDGRHIGKITELSVADALAFFKDLTLSEKDMQIANLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNT
LIVVEHDEDTMMAADYLIDIGPGAGIHGGQVISAGTPEEVMEDPNSLTGSYLSGKKFIPL
PPERRKPDGRYIEIKGASENNLKKVNAKFPLGTFTAVTGVSGSGKSTLVNEILHKALAQK
LHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKG
KSISDVLDMTVEDALSFFENIPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLAS
ELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIV
DLGPEGGAGGGTIVASGTPEEITEVEESYTGRYLKPVIERDKTRMKSLLKAKETATS

NT seq 2874 nt +upstreamnt +downstreamnt
atggctatggatcggatagaggtgaagggagccagggcgcataacctgaaaaatatagat
gtaacgattccgagagatcagcttgtcgttgtcacgggtttgtccggatcaggtaaatcc
tcccttgcctttgacacgatatatgctgaaggacagagacggtatgtcgagtcgctgtct
gcttatgcccgccagtttttagggcaaatggataagcctgatgtggatgcaattgagggg
ctctctcccgccatcagcattgatcagaaaacaacaagccgtaatccgaggtctactgtc
ggtacggtaactgagatttatgattatctgcgtcttttatatgcgagagtagggaagcct
cattgtccggagcacggaattgagattacatcccagaccatcgagcaaatggtggacaga
attctggaatacccggaacggacgaagcttcaggtgctggcgccgattgtctcaggccga
aaaggcgctcatgtcaaagtgcttgaacagattagaaaacaaggctatgtcagagtcaga
attgacggcgagatggctgagctttctgacgatatcgaattagaaaagaataagaagcat
tccattgaggttgtcattgaccggattgtcgtgaaagaaggagtggcagcccggctatca
gattcattggaaacggcgctccgtttaggtgaaggacgggttatgatcgatgtcatcggt
gaggaagagctgatgttcagcgagcatcatgcctgtccgcactgcggattttcaattggt
gagcttgagccgcgtctgttttcgtttaacagtccgttcggggcgtgtccgacgtgtgac
ggtctcggaatgaagcttgaagtggatgccgatcttgtcatccccaatcaagatttgtca
ttgaaggagaatgcggtcgccccttggacaccgatcagctcacaatattatcctcagctg
cttgaggcagtctgcacccactacgggattgatatggatgtgccggtcaaagatttgccg
aagcatcaactggataaagtgctgtacggcagcggagatgacctgatttatttccgatat
gaaaatgattttggacaaatccgcgaaggtgaaattcaatttgaaggcgtattgcgcaac
attgaaagacgctataaggagacaggctccgatttcatacgtgagcaaatggagcagtat
atgtctcagaagtcttgtccaacgtgcaaaggctatcggttaaagaaagaggcgcttgcc
gtactgattgacggccgccacatcggaaaaattaccgagctgtctgtcgccgacgcactt
gcctttttcaaagaccttaccctttctgagaaggatatgcagatcgccaatttgattttg
cgcgaaattgtggagcgcttaagctttctggacaaagtcggcctcgattacctgacattg
agcagggcagcgggtacattgtccgggggagaggcgcagcgcatcaggctggcgacacaa
attggctcgcgtttatccggtgtgctttatattttagatgagccgtctatcggtctgcat
cagcgtgataacgaccgcttgatcagcgctctgaaaaatatgagagacctcgggaacacg
ctgattgttgtcgaacatgatgaggacacgatgatggcagcagattatttaatagacatt
ggaccgggagccggcattcacggcggacaggtgatatctgcgggtacgccggaagaagtg
atggaagatccaaactcattaacgggcagctatttatcagggaaaaagtttatcccattg
cctcctgaaagaagaaagccggacggacgttacattgaaattaaaggtgcttcagaaaac
aacctgaaaaaagtgaatgccaagttcccgcttgggacgtttacagcagttacaggtgtt
tccggttcaggaaagagtacactcgttaatgaaattttgcataaggcgctggcgcaaaag
cttcataaagcgaaagcgaagcccggcagccataaagagattaaaggtttggatcattta
gataaagtcattgacattgaccaggcgccaatcggaagaacgccgagatccaaccctgcg
acatacaccggtgtatttgatgacattcgtgatgtattcgcgcagacaaatgaagcgaag
gtccgcggctataaaaaaggccgtttcagcttcaacgtgaagggcggacgatgtgaagcc
tgccgcggagacgggattattaaaattgaaatgcacttccttcctgacgtatacgttcca
tgcgaggtgtgtcacggcaaacgctataaccgtgaaacgcttgaagtgacgtacaaagga
aaaagcatctctgatgtgcttgatatgacggttgaagatgctctttctttctttgaaaat
atcccgaaaatcaaacgcaagctccaaaccctttatgatgttggtttaggttatattacg
ctcggccagccggcgacgaccttgtcaggcggagaagcgcagcgcgtgaagctcgcgtca
gagctgcacaaacgctcaaccggacgcacgctctacattttagatgagccgacgacaggt
ttgcatgtcgacgatatcgccaggcttcttgtcgtgctgcaacggttggtagacaacgga
gacactgtactggttattgagcacaaccttgatatcattaagacggccgattacattgtg
gatttgggcccggaaggcggagccggaggcggaaccattgtcgcgtctggaacgcctgag
gaaatcactgaagtggaagaatcgtatacaggccgttatttgaagcctgttatcgaacgt
gacaaaacacgcatgaaatcgctcttgaaagcgaaagaaacagctacatcttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (35)   

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