KEGG T03826: BM43

Burkholderia gladioli ATCC 10248: BM43_6981

Entry

BM43_6981         CDS       T03826

Name

(GenBank) hypothetical protein

K05591

ATP-dependent RNA helicase DbpA [EC:5.6.2.6]

Organism

bgo Burkholderia gladioli ATCC 10248

Brite

KEGG Orthology (KO) [BR:bgo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bgo03009]
    BM43_6981
Enzymes [BR:bgo01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     BM43_6981
Ribosome biogenesis [BR:bgo03009]
Prokaryotic type
  rRNA helicases
   BM43_6981

SSDB

Motif

Pfam:

DEAD Helicase_C DbpA ResIII AAA_22 CMS1 P-loop_SecA

Other DBs

NCBI-ProteinID:

AJW95775

Position

2:complement(3553302..3554699)

AA seq 465 aa
MTQATPNRPFSELALSPAVLANLEQLGYTEMTPIQAASLPLALAGQDLIAQAKTGSGKTA
AFSLALLSRLDTRRFDVQAMILCPTRELADQVAQEIRRLARAEENIKVLTLCGGTPMRPQ
AASLEHGAHIVVGTPGRIMDHLERGTLALGALNTLVLDEADRMLDMGFFDDIATVARQCP
TERLTLLFSATYPEGITKLSRQFLRNPKEIKLAEQHDARKIRQRFYEVTEDERLHAVGQL
LNHYRPASTIAFCNTKQQCRDLLDVLSAQGFHALALHGELEQRERDQVLIQFANRSCSVL
VATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGG
IEQAQGREVEWQPLASLTPASNEPLLPPMETLQILGGRKEKIRPGDVLGALTGDAGFQGS
QIGKINVTEFSTYVAVERSVAHEALRKLNGGKIKGKKVKVRLMDE

NT seq 1398 nt +upstreamnt +downstreamnt
atgacccaagccacgcccaaccggccgttcagcgagctcgcgctctcgccggcggtgctc
gccaatctcgagcagctcggctacaccgagatgacgccgatccaggccgccagcctgccg
ctggcgctggccggccaggacctgatcgcgcaggccaagaccggcagcggcaagaccgcc
gccttctcgctggcgctgctctcgcgcctggacacgcgccgcttcgacgtgcaggcgatg
atcctgtgcccgacgcgcgagctggccgaccaggtcgcgcaggaaatccgccgcctcgcg
cgcgccgaggagaacatcaaggtgctgacgctgtgcggcggtacgccgatgcgtcctcag
gccgccagcctggagcacggcgcgcatatcgtggtcggcacgccgggccgcatcatggac
cacctcgaacgcggcacgctcgcgctcggcgcgctgaacacgctggtgctcgacgaagcg
gatcgcatgctcgacatgggcttcttcgacgatatcgcgaccgtcgcgcggcaatgcccg
accgagcggctcaccctgctgttctcggccacctatcccgaaggcatcaccaagctgagc
cggcagtttcttcgcaatccgaaggagatcaagctggccgagcagcacgacgcgcgcaag
atccgccagcgcttctacgaggtgaccgaggacgagcgtctgcacgcggtgggccagttg
ctgaatcattaccggccggccagcaccatcgcgttctgcaataccaagcagcagtgccgc
gacctgctcgacgtgctgagcgcgcagggctttcatgcgctcgcgctgcatggcgagctg
gaacagcgcgagcgcgaccaggtgctgatccagtttgcgaaccgcagctgctcggtgctg
gtcgccaccgacgtggccgcgcgcgggctcgacatcgcccagctcgaggcggtgatcaac
gtggacgtgacgcccgaccccgaggtgcacgtgcaccggatcggccgcaccggccgcgcc
gaccaggaaggctgggcgctgagcctggccagcatgaacgagatgggccgcgtgggcggc
atcgagcaggcccaggggcgcgaggtggaatggcagccgctggcctcgctcacgcctgcc
agcaacgagccgctgctgccgccgatggagacgctgcagatcctcggcgggcgcaaggag
aagatccggcccggcgacgtgctcggcgcgctgaccggcgatgcgggcttccaaggctcg
cagatcggcaagatcaacgtgaccgagttctcgacctacgtggcggtggagcgcagcgtg
gcgcacgaggcgctgcgcaagctcaatggcggcaagatcaaggggaagaaggtcaaggtg
cggttgatggacgagtga

All links

Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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