KEGG   Brassica oleracea (wild cabbage): 106310439
Entry
106310439         CDS       T04124                                 
Name
(RefSeq) translation initiation factor IF-2, chloroplastic-like
  KO
K02519  translation initiation factor IF-2
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:boe03012]
    106310439
   03029 Mitochondrial biogenesis [BR:boe03029]
    106310439
Translation factors [BR:boe03012]
 Eukaryotic type
  Initiation factors
   MTIFs
    106310439
 Prokaryotic type
   106310439
Mitochondrial biogenesis [BR:boe03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    106310439
SSDB
Motif
Pfam: GTP_EFTU IF-2 MMR_HSR1 IF2_N GTP_EFTU_D2 Ras RsgA_GTPase Roc Arf MMR_HSR1_Xtn
Other DBs
NCBI-GeneID: 106310439
NCBI-ProteinID: XP_013603128
UniProt: A0A0D3DPY8
Position
C8:21595693..21600922
AA seq 1003 aa
MPSMLVLVGTLPSLASLVSPGGGGGASVSSYALVKRVSLPRRSVKGAKKWLCRYSLSTST
TDFIAEQTVSLDSNSFEGSIEEDEGEIVLKQAPKPVLKPPVARVSSAPWSKEGKFDGEKE
ERSKVIESLGEVLDKAERLEIPKPVSKEGGEGFKPSQPSANSSNSKGDGFGTRKTKTMKS
VWRKGDAVAAVQKVVKESPKIDNKGMQGDAKSGTQLSPPQQPLRAQPQLQGRPMVAQPPV
KKPILKDHGMATRPSGPILKDVGMASKPSVSEEVDSSSQSKERKPILVDKFASKKKGVDP
VASQTVLAPTKPGKGPPSNKFRVEQRNKKNASANPRRRMAAEDDADEDASELNVSIPGKG
RKGRKWSKASRKAVRLQAARDAAPVKAEILEVEEEGMSIEDLAYNLAIGEGDILGYLYSK
GIRPDGVQTLDREMVRMICRDYDVEVLDADSVQVEEMAKKKESFDEEDLEKLEDRPPVIT
IMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAF
GAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGASPERVM
QELSSIGLMPEDWGGDVPMVQISALKGENIDDLLETVMLVAELQELKANPHRNAKGIVIE
AGLDKAKGPFATFIVQKGTLRRGDVIVCGEAFGKVRALFDHSGERVDEAGPSIPVQVIGL
NNVPIAGDEFEIVSSLDVAREMAEARAVSLRDERISAKAGDGKVTLSSLASAVSAKKMSG
LDLHQLNIILKVDVQGSIEAVKQALQVLPQENVTLKFLLQATGDVSNSDVDLASASEAII
FGFNVKASGSVKKAAENKGVEIRLYRVIYELIDDVRNAMEGLLESVEEQIPIGSAEVRAT
FSSGSGRVAGCMVNEGKFVKDCGIKVIRKGKTVHVGVLDSLKRVKENVKEVSAGLECGIG
MDDYDDWIEGDTIEAFNAVQKRRTLEEASASMSAAIEEAGVEL
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgccgtcgatgctggttctcgtcggcacattgccgtcgttagcttctctggttagtcca
ggaggtggtggtggtgcgagtgtttcgtcgtacgcattagtaaaaagggtttctttgccg
aggagaagcgtcaaaggagctaagaaatggttgtgtagatattctctttccactagtact
actgacttcatcgctgagcaaactgtttctttagattcaaactcttttgaaggaagtatt
gaagaggatgagggtgagatcgtgctcaagcaggctcctaagcctgtgttgaagccccct
gtggcgagggtgagttctgctccttggagtaaggagggtaagtttgatggagaaaaagaa
gagaggagtaaggttattgagtctcttggcgaagtgttggataaagctgagaggttggag
attccgaaaccggttagtaaagagggtggtgagggttttaagccgtcacagcctagtgct
aacagtagtaactccaaaggtgatggctttgggacacggaagacgaaaactatgaagagt
gtgtggcgtaagggtgatgctgttgcagctgtgcagaaagttgttaaggaatcacctaaa
attgataataagggaatgcagggtgatgccaaatcaggcactcaattgtcaccacctcag
caacctttaagagctcagccacagttacaaggcaggcctatggtagctcagccacctgta
aagaaacccattttaaaagatcatggtatggcaacgaggccttcaggtcccatcttaaaa
gatgttggtatggcgtcaaagccttcagtttctgaagaggttgattctagctcacaaagt
aaagaaaggaagcccattttggttgataagtttgcatccaagaaaaaaggtgttgatcct
gtggcctctcagactgtgttggctcctaccaagcctggaaagggtccaccttctaacaag
ttcagagttgagcaacgtaataaaaaaaatgcatcagctaatccaaggcgaagaatggct
gctgaagatgacgccgacgaagatgcatccgagttaaatgtctcaattccaggaaaaggt
agaaaagggagaaaatggagtaaagctagtaggaaggctgtaagactccaggctgccaga
gacgcagcacctgttaaagctgaaatcttagaggtagaggaagaaggcatgtccatcgag
gatttggcttacaacctagccataggtgaaggtgacatccttgggtatctatattcaaaa
gggattagacctgatggtgtgcagaccttggacagagagatggtgaggatgatttgtaga
gattacgatgttgaggtccttgatgctgattcagttcaagttgaagaaatggcaaagaag
aaggaaagttttgatgaagaagatttggaaaagttagaagacaggcctcctgtcatcacg
attatgggtcatgtggaccacggaaagaccactcttctggactatatcagaaaaagcaag
gttgctgcttcagaagcaggggggattacacaaggaattggtgcatataaggtgtcagtg
cctgttgatgggaagttgcagtcctgtgttttccttgatactcctggacacgaggcgttt
ggtgcaatgagagctcgcggagcacgggtcactgacatcgcaatcattgtggttgctgct
gatgatggaattcgacctcaaacaaatgaagcaatagctcacgcaaaggctgctggtgtc
cctatagtcatagctataaataagatagataaagacggagctagtccagagagagtaatg
caagagctttcttcaattggtttgatgcctgaagattggggtggtgatgtgccaatggtt
cagatcagtgcgttgaaaggcgagaatatcgatgatctgttggaaactgtcatgcttgtt
gcagagctgcaagagttgaaagcaaacccacacagaaatgccaagggcattgttattgag
gctggacttgataaagcgaaaggaccatttgcgacattcattgttcagaagggcacgttg
agaagaggggatgttattgtttgtggagaagctttcggaaaggtacgagctttatttgat
cacagcggcgaacgagttgatgaagctggaccttccatacctgtacaggtgattggttta
aataatgtacccattgctggtgacgaatttgagatcgtctcttcacttgatgtggcgcgt
gagatggcagaagcacgtgcagtatcactacgagatgaaagaatatctgcaaaggctggg
gatggaaaggtcaccctttcttccttggcttctgctgtatcagcgaaaaagatgtcaggc
ttagatttgcatcagcttaatatcatattgaaggtcgatgtacagggatccattgaagct
gtcaaacaagctctgcaagttctccctcaagagaatgtgaccttgaaatttttgctacaa
gcgacaggggatgtgagcaacagtgatgttgatctagcatcagcgagtgaagccatcatt
tttggatttaatgtcaaagcatctggttctgttaagaaagctgcggaaaacaaaggtgtt
gagatccgattatatcgagttatctatgaacttattgacgatgtacgaaacgcaatggaa
ggacttcttgagtctgttgaggaacaaataccaattggatcagcagaagttcgagctact
ttcagcagtggaagcggtcgtgtggctggatgcatggtgaacgaagggaagtttgtcaaa
gattgtggcatcaaggtgatccggaagggtaagactgtacatgttggtgtccttgattct
cttaagcgagttaaagaaaatgtgaaagaggtgagtgctggattagaatgtggtatcggt
atggatgactatgacgattggatcgaaggagacaccatcgaggcctttaacgcggttcaa
aagaggcgaacgcttgaagaagcatcagcttcaatgtctgctgcaatcgaagaggctgga
gttgaattgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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