KEGG   Brassica oleracea (wild cabbage): 106319335
Entry
106319335         CDS       T04124                                 
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpX isoform X1
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:boe03110]
    106319335
Chaperones and folding catalysts [BR:boe03110]
 Heat shock proteins
  HSP100
   106319335
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small MCM AAA_5 Sigma54_activat Mg_chelatase AAA_22 Sigma54_activ_2 RuvB_N AAA_16 IstB_IS21 ABC_tran AAA_7 AAA_18 AAA_14 DEAD NACHT T2SSE nSTAND3 Urease_linker TsaE AAA_28 AAA_29 AAA_24
Other DBs
NCBI-GeneID: 106319335
NCBI-ProteinID: XP_013613077
Position
C9:complement(36294436..36298474)
AA seq 589 aa
MLCSLSISRFLSRKTSLVSRSFRLIISADDTLHRIPLQPPTANTTLTTPFPFFSSRRSIY
DSSGGDYDYIRSDVNCPRCSAHMLVVFSNRPLSLTAREPGIYQAVNFCPQCKSAFYFRPF
KLSPLQGSFIELGKVKKGADADDDDDDDDGDDRSSKIQGFKNEDDADSSSGLVKLPTPKE
ICQGLDQFVIGQDKAKKVLSVAVYNHYKRIYHASKLKGSGSESVNLVMEDDDDSIDLVEL
DKSNVLLLGPTGSGKTLLAKTLARLVNVPFAIADATSLTQAGYVGEDVESILYKLYVEAG
CNVEEAQRGIVYIDEVDKMSMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLR
RDPRGDSIQMDTKDILFICGGAFVDLEKTVSERQHDASIGFGASVRTNMNTSGFSSSAVT
SSLLESLQSEDLVAYGLIPEFVGRLPIFVSLSALNEDQLVQVLTEPRSALGKQYKKLFRM
NNVQLHFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDGKSEGSQSIKAVLV
DEEAVGSVGSPGCGAKILRGDDVPQQHFEQTESNVNVVQHVLTRVFCES
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgttgtgtagcttatccatctcgaggtttctgtcgaggaagacatctcttgtctcccgc
agtttcagactcattatctccgccgacgacactctccaccgcatccctcttcaacccccc
actgccaacaccacccttactacccctttccctttcttctcctcccgccgtagtatttac
gactccagcggcggtgattatgattacatcaggagtgacgtcaattgccctcgttgctcc
gcccacatgctcgtcgtcttctccaatcgtcctttgtccctcactgccagagagcctggc
atctatcaagccgttaacttctgtccccaatgcaagtccgctttttacttcaggcccttc
aagctctctccccttcaaggcagctttatcgagcttggcaaggtcaagaaaggtgctgat
gctgatgacgatgacgacgacgacgacggtgatgacagatcttcgaagattcaaggcttc
aaaaacgaagatgatgcagatagcagcagcggcttggtgaagcttcccacacctaaggag
atctgtcaggggcttgaccagtttgtcattggtcaggataaggcaaagaaggtgctctct
gttgctgtttacaatcattacaaaagaatatatcatgcttccaagctaaaaggttctggt
tcagaatcagttaaccttgttatggaggatgatgatgatagcattgatctcgtggagttg
gataagagcaatgtgttgttgcttggccctactggttcaggaaagaccttactggcaaaa
actttagcgcgtcttgtcaatgttcctttcgccattgctgatgccacttcattaactcag
gcaggttatgtcggtgaagatgtggaatcaatactctacaagctatacgtggaagctggg
tgcaatgtagaagaagctcaaaggggtattgtgtacattgatgaagttgataagatgagc
atgaagtctcatagttcaaatggtggtagagatgtttctggagaaggtgtgcagcagtca
ttgctgaaattgctggaaggaactgtggtcagtgtcccgattccagagaaaggattacgg
agagatcctcgaggagatagcatccagatggatacaaaagacattctttttatttgtggt
ggagcatttgtcgatctggagaaaactgtttctgaacgtcaacacgatgcctctattggt
tttggtgcttcggttcgtacaaatatgaacacttctgggttcagtagttccgcagtaaca
tcctcattgttggaatctttacaaagtgaggatcttgttgcgtatggtctcattcctgag
ttcgttggaagactacccatcttcgtgagcttatctgcactaaatgaagaccagcttgta
caggttctaacagagcctaggagtgcattgggcaaacagtacaagaagttgtttcgcatg
aacaatgtccaactacattttactgaaggtgcaacgaggcttatcgcgaggaaggccatg
tcaaagaacactggtgcacgtggcttacggtctatacttgaaagtatcctcacagaagca
atgttcgaggtaccagatggcaagtcagaaggatcacagagtataaaggcggtcttggtg
gatgaagaggctgttggttcagtaggatcaccaggatgtggtgcaaaaatccttagagga
gatgatgttccgcaacaacattttgaacaaactgagtcaaatgtaaacgtcgtgcaacac
gtgctaacaagagtattttgcgaaagctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (25)   
   Pfam (25)   
All databases (36)   

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