KEGG   Bordetella sp. H567: AKI39_24675
Entry
AKI39_24675       CDS       T04979                                 
Name
(GenBank) tRNA modification GTPase TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
boh  Bordetella sp. H567
Brite
KEGG Orthology (KO) [BR:boh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:boh03016]
    AKI39_24675
Transfer RNA biogenesis [BR:boh03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AKI39_24675
 Prokaryotic type
   Methyltransferases
    AKI39_24675
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N RsgA_GTPase Dynamin_N Ras GTP_EFTU PduV-EutP AIG1 Arf MMR_HSR1_Xtn Cyclase_polyket Roc ABC_tran
Other DBs
NCBI-ProteinID: AOB33266
UniProt: A0A1B2R8F8
Position
complement(5514131..5515546)
AA seq 471 aa
MSPIASVPIAAIATAPGRGGVGIVRVSGASLSILVRRLFQGELIARHAHLLPFQTAEGEV
LDEGIALFFPGPHSYTGEDVLELQGHGGPAVLRRVLQLCLDAGREMGLRIAEPGEFTQRA
FLNGRIDLAQAEAVADLIEATSEAAARGAMASLSGVFSRQVNALADRIVHLRMLVEATLD
FPEEEIDFLEKYQARPTLEALSTDLRRIIAQTRQGVILREGLHVVLAGRPNVGKSSLLNA
LAGDEIAIVTPIAGTTRDKVVQEIHLDGIPLHIVDTAGLRETDDPVEQIGIARTWQEIER
ADVILHLQDATAEGEEALDAGIAARLPPGTPVMKVVNKIDLVAADDARVADNKARIAARN
ADATAPDNAVLHISARTGTGLDALRKALLDIAGWNPGAESPWLARERHLRALQQAEEHLA
IAATHAAQDDRVLDLFAEELRLAHESLSSITGEFTSDDLLGEIFSRFCIGK
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgtcccccatagcatccgtgcccatcgcggcgatcgccacagcgcccgggcggggcggc
gtgggtatcgtgcgcgtttccggtgcgtccctgtccatactggtgcgtcgtcttttccag
ggcgagctgatcgcccggcatgcgcacctgctgcccttccagaccgccgaaggcgaggtg
ctggacgaaggcatcgcgctgttctttccggggccgcattcctatacgggcgaagacgtg
ctcgaacttcagggacacggcggcccggccgtgctgcggcgcgtgctgcagctgtgcctg
gatgcggggcgcgagatgggcctgcggatcgccgaaccgggcgaattcacgcagcgcgcg
tttctgaacgggcgcatcgacctggcgcaggccgaagccgtcgccgacttgatcgaggcg
acgtcggaggcggcggcgcgcggggcgatggcttcgctgtcgggcgtcttctcccgccag
gtcaacgcgctggcggaccgcatcgtgcacctgcgcatgctggtggaggccaccctggat
ttcccggaagaggagatcgatttcctggaaaagtaccaggccaggccgacgctggaagcg
ctgtccacggacctgcgccgcatcatcgcgcagacacgccagggtgtgatcctgcgcgag
ggcctgcacgtggtgctggccggccggcccaacgtggggaaatccagtctattgaatgcc
ctggcgggcgacgaaatcgccatcgtcacccccatcgccggcaccacgcgcgacaaagtg
gtgcaggaaatccatctggacggtatcccgcttcacatcgtggacacggcgggcttgcga
gaaaccgatgacccggtagagcagatcggcatcgcgcgcacctggcaggaaattgaaagg
gccgacgttattttgcatctgcaggatgccacggcggagggcgaagaagccctggacgcc
ggcatcgccgcgcggctgccgcccggcacgccggtgatgaaggtcgtgaacaagatcgac
ctggtcgccgcggacgatgcgcgtgtcgccgacaacaaggcgcgtatcgcggcgcggaac
gccgatgccacggcgccggacaacgccgtactccatatctccgcgcgcaccggcacgggc
ctggacgccctgcgcaaggcgctgctggacattgccggctggaaccctggcgcggaatcg
ccttggctggcccgcgaacgccacctgcgcgccctgcagcaagccgaggaacacctggcc
atcgcggcgacgcacgccgcgcaggacgatcgtgtattggacctgttcgcggaagagctg
cggcttgcgcatgaaagcctgtcctcgatcaccggtgaattcaccagcgacgatttgctg
ggagaaattttttcccgcttctgtattggaaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (31)   

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