KEGG   Butyrivibrio proteoclasticus: bpr_IV188
Entry
bpr_IV188         CDS       T01292                                 
Name
(GenBank) helicase RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bpb  Butyrivibrio proteoclasticus
Pathway
bpb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    bpr_IV188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpb03400]
    bpr_IV188
Enzymes [BR:bpb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     bpr_IV188
DNA repair and recombination proteins [BR:bpb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     bpr_IV188
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 SH3_13 Viral_helicase1 AAA_11 UvrD-helicase PIF1 AAA_23 AAA_12 T2SSE SLFN-g3_helicase nSTAND3 AAA_22 Helicase_RecD Cul7 DEAD AAA_16
Other DBs
NCBI-ProteinID: ADL36552
UniProt: E0S570
Position
pCY186:171855..173360
AA seq 501 aa
MDVLQTVESYINDTGSTWYKPSPKYKRLFDGGVKRKVLVEKNGYYTLPSVCSREIELAKR
IVTHLHFGEDERKRYPKEFIEIYIGFYEEQEGIRLDEWQKDAVFQSVNNNLFILTGGPGT
GKTATLKCILYCLKKILKTEDIIFTAPTGKAARRITESVGCPAQTVARALGLKDDNSKPK
PVNNACMIVDEISMLDTVTACALFTAISHETKLILVGDAEQLPSVGYGSVLRDLIDAGIP
TTKLEKTFRQASESGLFANIAQIKAGLYTGFEERDDFKVFKAENTSKAKEIMVREYLKAT
EKYGLDQVVCLTPYRRKGEACAIKLNNILQAIINPPKDNGLCFSYTTKEEDGFRYQTKLR
VGDPVMQLANAERVANGDVGTVCEIDKDKQRLKVQFSDCIVTYSKKQLSQLSLAYAMSVF
KSQGSEYKAVITSAISDDLDMLSRNTIYTAVTRAKQECIVVTNEDTAKKACKKESGYDRV
TRLSEEIMHQKARYELFISLM
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggacgtattacaaacagtcgaaagctacataaacgataccggatccacatggtacaag
ccttcacccaagtacaaaagactatttgatggaggcgtaaaaagaaaagtactggtcgaa
aagaacggttactacactctcccatccgtatgttcaagggaaatagaacttgcaaagcga
atagtcactcatcttcactttggtgaagacgaaagaaaaagatacccaaaagaattcata
gaaatctacataggattctacgaagagcaggaaggtatcaggcttgatgagtggcaaaag
gatgctgtttttcagagtgtgaacaataacctctttatccttacaggtggaccgggaaca
gggaaaactgcaactctaaaatgcatcctttactgccttaaaaagatccttaagacagag
gatattatctttactgctccaacaggaaaagccgcacgaaggatcaccgagtcggttgga
tgccctgcacagaccgtggcaagagctctggggcttaaggatgataactcaaaaccaaag
ccagtcaataatgcatgcatgatagttgatgagatatccatgctggataccgtcacagcc
tgcgcgctgtttaccgcaataagccacgaaacaaagctcatccttgttggcgatgcggag
cagcttccaagtgtaggctacggctctgtccttcgcgatctcattgatgcagggattcct
accacaaagcttgagaagacattcagacaggcttctgaaagcggactatttgccaacatt
gcgcagataaaagcaggtctttataccggctttgaagaaagggacgactttaaagtattt
aaagcagaaaacacttccaaggcaaaagaaatcatggtcagggaatacctaaaggccact
gaaaagtacggtctagaccaggttgtatgccttactccctacagacggaaaggtgaagct
tgcgcaataaagctaaataacatattgcaggctatcatcaatcctccaaaggataatggt
ctatgtttttcatataccacaaaagaagaggacggctttagataccagaccaaactaaga
gtcggtgatcctgtaatgcaactagccaatgctgaaagagtcgcaaatggcgatgttggc
actgtctgcgagattgacaaggacaagcagcgcttaaaggtacaattctcagactgcata
gttacttactcaaaaaaacagctatctcagctgtcacttgcatatgcgatgagtgtattt
aaaagccaaggctctgaatataaggcagttataacctctgctatttcagatgatctggac
atgctctcacgtaacaccatatatacagcagttacaagagctaagcaggaatgcatcgta
gttacaaatgaagacacagcgaaaaaagcctgcaagaaagagtccggatatgatagagtt
acacgtctttcagaagagataatgcatcaaaaagcgcgatatgaactgtttattagctta
atgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (48)   

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