KEGG T03024: BBN

Burkholderia pseudomallei MSHR146: BBN_6058

Entry

BBN_6058          CDS       T03024

Name

(GenBank) helicase conserved C-terminal domain protein

K05591

ATP-dependent RNA helicase DbpA [EC:5.6.2.6]

Organism

bpsu Burkholderia pseudomallei MSHR146

Brite

KEGG Orthology (KO) [BR:bpsu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bpsu03009]
    BBN_6058
Enzymes [BR:bpsu01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     BBN_6058
Ribosome biogenesis [BR:bpsu03009]
Prokaryotic type
  rRNA helicases
   BBN_6058

SSDB

Motif

Pfam:

DEAD Helicase_C DbpA ResIII CMS1 AAA_22 WSD

Other DBs

NCBI-ProteinID:

AHG70509

Position

2:complement(3231292..3232689)

AA seq 465 aa
MTYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA
AFSLALLARLDARRFDVQALVLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQ
TQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEADRMLDMGFFDDIAKVARQCP
PTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL
LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVL
VATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGG
IEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFSGA
QIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLMDE

NT seq 1398 nt +upstreamnt +downstreamnt
atgacctacccccccaccgccacgccgttcagcgcgctggcgctgacgcccgcgacgctc
gcgaatctcgcgcagctcggctacaccgacatgacgccgatccaggccgcgagcctgccg
atcgcgctcgccggccacgacctgatcgcgcaggcgaaaaccggcagcggcaagacggcc
gcgttctcgctcgcgctgctcgcacgcctcgacgcgcgccgcttcgacgtgcaggcgctg
gtgctgtgcccgacgcgcgaactggccgaccaggtcgcgcaggaaatccgccgcctcgcg
cgcgcggaggagaacgtcaaggtgctgacgctgtgcggcggcacgccgatgcgccctcaa
acgcagagcctcgaacacggcgcgcacatcatcgtcggcacgccggggcgcatcatggat
catctggaccgcggccatctgacgctcgacgcgctgaacacgctcgtgctcgacgaagcg
gaccggatgctcgacatgggtttcttcgacgacatcgcgaaggtggcgcggcaatgcccg
ccgacgcgccagacgctgctgttctccgccacgtatccggacgggatcgcgaagctcagc
cagcagttcctgcgccatccgaagagggtgaagctcgaggaacgccacgacgacagcaag
atccgccagcgcttctacgaagtgaccgaggacgagcggctgcatgcggtcggcctgttg
ctgaaccactatcgcccggtgagcacgatcgcgttctgcaacacgaagcagcaatgccgc
gatctgctcgacgtgctgcatgcgcagggtttccacgcgctcgcgctgcacggcgagctc
gagcagcgcgagcgcgaccaggtgctgatccggttcgcgaaccgcagttgctcggtgctc
gtcgcgaccgacgtcgccgcgcgcggcctcgacatcgcgcagctcgaggcggtgatcaac
gtcgacgtgacgcccgacccggaagtgtacgtgcaccgcatcggccgcacgggccgcgcc
gaccaggacggctgggcgctgagcctcgcgagcatgaacgagatgggccgcgtgggcggc
atcgagcaggcgctcgcgcgcgaagtcgaatggcatccgctcgccgaattgaaggccggc
ggcgacgcgccgctgctgccgccgatggagacgctgcagattctcggcggccgcaaggac
aagattcgccccggcgacgtgctgggcgcgctgacgggcgacgcgggcttcagcggcgcg
cagatcggcaagatcaacgtgaccgagttctcgacctatgtggcggtggaacgcggcatc
gcgcgcgacgcgctgcgcaagctcaacgcgggcaagatcaagggcaagcgggtgaaggtg
cggctgatggacgaatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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