KEGG   Brachybacterium vulturis: CFK38_01155
Entry
CFK38_01155       CDS       T05108                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
brz  Brachybacterium vulturis
Pathway
brz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:brz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFK38_01155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brz03400]
    CFK38_01155
DNA repair and recombination proteins [BR:brz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CFK38_01155
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CFK38_01155
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_29 DnaJ_CXXCXGXG SMC_N AAA_21 Anti-TRAP nSTAND1 AAA_16 RsgA_GTPase AAA_25 AAA_22 MeaB DUF5351 Viral_helicase1 CbiA
Other DBs
NCBI-ProteinID: ATG50283
UniProt: A0A291GIC2
Position
256616..259219
AA seq 867 aa
MDLPDLSLTGGDDGFVHVRGARLHNLREVQVDLPRGRLVAFTGVSGSGKSSLAFGTIHGE
SQRRYLESVAPFARRLIGSAVDPQVEAVTGMPPTVALEQRTSAGGARSTVGTTTNLSNAI
RLLYSRVGDHPSDVLEKGSALHGGRLTSDFFSPNTPDGACPRCHGAGVLREPTESSMVPD
PSLPISEGAIAAWPGAWLGKNFRDILDTLGVDVHRPWRDLPEQTRQWILHTEEQPVVTVH
PVREPGQTHGTYRGQWRSVERYLRDTVATSKAESSRRRALTHFSVTPCPLCEGHRLGPDA
LRVTYIGRPIWQLAAMPLDDLLTALTSRLGALPAEEGIPEQEAERILLPTVLPVLGTIVG
LGLGHLALDRPAGTLSTGELQRLRLAAQLRSGLFGVAYVLDEPSAGLHPSEKGVLQHLLD
SFLSEGNSVLLVEHDMTLVADADWIVDVGPGAGADGGEVLYSGVVDGLGEAKDSVTARYL
QPGALTLRTPSEVRDARGWLEIDALATRTLQGVDLRLPLRSFTAVTGVSGAGKSTLVTHA
LGTVLGERVRTTVADEPDPTADAGESTASEIGPGSDLAADRVRHGEVRGSEGIDRLVHIT
QTPIGRTPRSCLATYTGLFDRVRRLFADTSEARARCWGVGRFSYNVAEGRCPECSGTGHI
EVELVFLPGSYATCPRCHGTRYSPETLEVTWQGLSIAEVLSLSVARAREVFADDPRISRA
LDALAAIGLGYLALGQPATELSGGEAQRIKLATELQRTVRGHSVYLLDEPTSGLHPADVD
LLVGELNRLVDAGQTVVVVEHDQRVIAQSDHVLDMGPGAGDKGGRIIAQGAPAQILEAEA
GATGSELRKASAQLLKPPLPAMSLNRE
NT seq 2604 nt   +upstreamnt  +downstreamnt
atggacctccccgacctctccctgaccggcggcgacgatggctttgtgcacgtgcgcggg
gcacgtctgcacaatctgcgcgaggtgcaggtggatcttccgcgcggtcggctggtcgcc
ttcaccggtgtctccggctccgggaagtcctcgctcgcgttcggcacgatccacggtgag
tcccagcgccgctatctcgagtcggtcgcgccgttcgcccggcggctgatcggcagcgcc
gtggaccctcaggtcgaggcggtgaccgggatgccgcccacggtcgcgctcgagcagcgc
acctctgcgggcggtgcccgttccaccgtcggcaccaccacgaacctctccaacgcgatc
cgtctgctgtactcacgggtcggggaccatccctccgacgtgctcgagaagggctctgcc
ctccacggcggccgtctgacctctgatttcttctcgccgaacaccccggacggcgcctgt
ccccgctgtcacggggcgggtgtgctgcgtgagccgacggagtcctcgatggtcccggat
ccctcgctgccgatcagcgagggcgcgatcgccgcctggcccggggcgtggctgggcaag
aacttccgcgacatcctcgacaccctcggcgtcgacgtccatcgtccctggcgcgacctg
ccggagcagacccgccagtggatcctccacaccgaggagcagccggtggtgaccgtccat
ccggtgcgcgaaccgggccagacccacggcacctaccgggggcagtggcgcagcgtcgag
cggtatctgcgcgacaccgtggcgacctcgaaggcggagtcctcccggcggcgcgccctc
acccacttctcagtgacgccctgcccgctgtgcgagggccaccgactgggtccggacgcc
ctgcgcgtgacctacatcggacgcccgatctggcagctggccgcgatgccgctggacgat
ctgctgaccgcgctgacctcccgcctcggcgcgctgcccgcggaggagggcatccccgaa
caggaggcggagcggatcctgctgcccaccgtcctgcccgtgctgggcaccatcgtgggt
ctcggcctcgggcatctcgccctggaccgtccggcggggaccctctccaccggcgagctg
cagcggctgcggctggccgcgcagctgcgctcagggctgttcggggtggcctacgtgctg
gacgagccctcggccgggctgcatcccagcgagaagggcgtgctccagcatctgctggac
tccttcctctccgaggggaactcggtgctgctggtcgagcacgacatgaccctggtcgcc
gacgccgactggatcgtggacgtgggcccgggcgccggggccgacggcggcgaggtgctc
tactcgggcgtggtcgacggcctcggcgaggcgaaggactcggtgaccgcccgctatctg
cagcccggagcgctcaccctgcggaccccgtccgaggtgcgggatgcccgcggatggctc
gagatcgacgcgctggccacccgcaccctgcagggcgtcgacctgcggctgccgctgcgc
tcgttcaccgccgtgaccggggtctccggggccgggaagagcaccctggtcacccatgcg
ctcggcaccgtgctcggcgagcgcgtgcgcaccacggtggccgacgagcccgacccgacg
gccgatgcgggcgagagcaccgcctccgagatcggccccggcagcgacctcgccgccgac
cgggtgcggcacggggaggtgcggggcagcgagggcatcgatcggctcgtgcacatcacc
cagacgccgatcggccgcaccccgcgctcctgcctggccacctacacgggcctgttcgac
cgggtgcggcgcctgttcgccgatacctccgaggcgcgggcgcgctgctggggcgtgggc
cgcttctcctacaacgtcgccgaggggcgctgccccgaatgcagcgggaccggacacatc
gaggtggagctggtgttcctgcccggttcgtacgcgacctgcccacgctgccacggcacc
cgctacagccccgagaccctcgaggtgacctggcaggggctgagcatcgccgaggtgctg
tcgctgtccgtggcacgtgcccgcgaggtgttcgcggacgatccgcggatctcccgggca
ctggatgcactggccgcgatcgggctcggctacctcgccctcggccagcccgccaccgag
ctctccggcggtgaggcgcagcggatcaagctggccaccgagctgcagcgcaccgtgcgc
gggcacagcgtctacctgctggacgaacccacctcgggtctgcaccccgcggacgtggat
ctgctggtcggcgagctgaaccgactggtggacgccgggcagaccgtggtcgtggtcgag
cacgaccagcgcgtgatcgcccagagcgaccacgtgctcgacatgggcccgggcgccggc
gacaagggcgggcggatcatcgcccagggtgctcctgcacagatcctcgaggcggaggcc
ggcgcgaccgggagcgagctgcggaaggcctccgctcagctgctgaagcccccgctgccc
gccatgtccttgaaccgggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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