KEGG   Bombus terrestris (buff-tailed bumblebee): 100643408
Entry
100643408         CDS       T04364                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC100643408
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:5.6.2.7]
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:bter00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bter03041]
    100643408
Enzymes [BR:bter01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100643408
Spliceosome [BR:bter03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    100643408
SSDB
Motif
Pfam: DEAD Helicase_C AAA_19 CMS1 AAA_30
Other DBs
NCBI-GeneID: 100643408
NCBI-ProteinID: XP_012166030
UniProt: A0A9B2JNJ7
Position
LG B07:complement(14711207..14716583)
AA seq 1237 aa
MSFMLQEKIEKMSHIIAHDIDKKPRTKDIKVQEDITFYQMGFSQKILDGLSLCGFQRPSP
IQLKAIPLGRCGFDLIVRAKSGTGKTLVFCIISLEMIDIDISSVQVLVLAPTREIAVQIA
QVFSSVACEIEGLKVEVFIGGTAIESDKKKLNNCHIAVGAPGRIRHLIDKEFLKVENVRL
FILDEADKLMETSFQKDINYIFSKLPLRKQVIASSATYPGDLEIFLQAYMCSPVLASPDN
NEPILVGLTQFITVVPSHPNVMKQVQIKVDELIKIFNKIPFKQSLVFSNYQSRAQSVCNK
ISAMGFKATFFAGNQDMNKRLEAINKLKTFKCKIMVTTDLTARGIDADNVNLVVNLDLPI
DAPTYLHRIGRAGRYGSYGLSITIVAENELETLQKLLMSIGGPNFYVLKLPFDYPDDIWN
TSNTKFEKLYAKSEKDENQFDIKPITTAINDLSMNTANIEVQNNIKSKVNETTDNINKEV
TENVEEVKNNIMDFSCLRNMPNLQNKIKVNSLFVPCINLIDESQCIKKKKKETTIMSYSV
SKPKIIHSFTLDAAINNSSSWQKYNENVVFEVDLSDLQEDDLSNSNIDMIIEFTKYNFQS
KNAEKSSFHHNYVNIDVHSEDTISRSTVHNEMQKQDLEQKIQKKSDVTADTLITISNNIQ
NKTDVSILEELNSHLTEYMKSSNTFCDELCSNNEEILLKQAFIWKNKLDFEIKLLNNVME
VMKESIQKFIYQKHVEMLKIFYRVQKKALLCVYPEIRNDDEVNDTYLYFRTSVDENVLEL
YKEIENFKSSHRKCGENFNAYFPYPVELDSYMPNLMISNTDREDYLNALRYLYSNPYPRE
HLLQIASFVTFIDEPKKYDLIQKLKSLNNSSVNELLTVIQSELSKKESNKNESKEQEDKL
LEHFDSTNRGENVINSKVDILHKTLDNIGNMTSQEENVSLSDNKCDKMSNNYSFDNSIST
DLGLDDLFKIQKVARHENCNLTSSTSSIFSSESDTVKEHRLNGKVNTKNKFRRRKKIQKQ
GDNTAKEQFIIRSSDSTDTYEKQYTSQTQSDLSSRSMTDRLNSSFVETNLSRKNSQNIQD
IFNCQESYVDNEPQSSVSIPRISEHRKNNSCNFSPTPLTKNVSQRHLDNEVTTEKTNICN
LHQQKSKNPVNSQYYAPFYNYMPNVPYNQVEDYMYMPGHLSRNIFSENIYHFPHSSSDNL
NEVEIDQFLSSLREETNRLHLELYKSEMLRNAMKNYN
NT seq 3714 nt   +upstreamnt  +downstreamnt
atgtcatttatgttacaggagaaaatagagaaaatgtctcatattattgcacatgatatt
gacaaaaagccacggacaaaggatattaaagtacaagaagatattacattttatcaaatg
ggattttcccaaaaaattttggatggattatctctttgtggtttccaaagaccttcaccc
atacaattaaaagcaattcctttaggaagatgtggttttgacttaatagtacgtgccaaa
tcaggaactggtaaaactttagtgttttgtataatatcacttgaaatgattgatatagat
atatcgtctgtacaagtattagtattagcacctactagagaaattgctgtacaaattgca
caagttttttcatctgtagcttgtgaaatagaaggtttaaaagttgaagtatttatagga
ggaacagctatagaaagtgataaaaagaaattgaataattgtcacatagctgttggtgct
ccaggtagaattagacatttaattgataaagaattcttaaaagttgaaaatgttagatta
tttattcttgatgaagcagacaaattaatggaaaccagttttcagaaagacattaattat
atcttttcaaaattaccactaaggaaacaagttatagcatcaagtgccacttatccggga
gatttggaaatatttttacaggcatatatgtgctctcctgttttagcatctccagataac
aatgaaccaatacttgttggactcacacagttcataacagttgttccttctcatccaaat
gttatgaaacaggttcaaataaaagtagacgaattaataaagatatttaacaaaattcca
ttcaaacaaagtttagttttttcgaattatcaatcaagagcccaatctgtgtgtaacaaa
attagtgctatgggttttaaagcaaccttttttgctggaaatcaagatatgaataaaaga
cttgaggccattaataaattaaagacttttaaatgtaaaataatggtaacaactgattta
actgcaagaggtatagatgcagataatgtaaatttagttgtaaaccttgatttacccata
gatgcaccaacatatttgcatagaataggaagagctggacgttatggatcttatggtctc
tctataacaatagttgcggaaaatgagttagaaacattacaaaaattattaatgtccatt
ggaggtccaaatttttatgtattgaaacttccttttgattatccagatgatatttggaat
acttctaatacaaaatttgagaaactttacgcaaaatctgaaaaagacgaaaatcaattt
gacattaaacctatcactacagctattaatgatttatctatgaatactgctaatatagaa
gtacagaataatataaagtcaaaagttaatgaaacaacagataatataaataaagaagtt
acagaaaatgtggaagaagtaaaaaataatataatggatttttcctgtttaagaaacatg
cctaatttacaaaataaaataaaagttaattctttgtttgtaccatgtattaatctgata
gatgaatctcaatgcattaaaaagaagaagaaagagactacaatcatgtcgtacagtgtg
tctaagcccaaaattatacatagttttacattggatgccgcaatcaataattcttccagc
tggcagaaatacaatgaaaatgtggtatttgaagttgatttatcagatttacaagaagat
gatttatcaaattctaatattgatatgattattgaattcacaaaatataattttcaaagt
aaaaatgcagaaaaatcttcttttcatcataattacgtgaatattgatgtacattctgaa
gataccatttctagaagtactgtacataatgaaatgcagaaacaagacctagaacagaaa
attcagaaaaagagtgatgtaactgctgatactctgataactatctcaaataatattcaa
aataagacagatgtttccattttagaagaattgaattctcatctcacagaatatatgaaa
agttctaatacattttgtgatgaattatgttcaaacaacgaggaaatattattgaaacag
gcatttatttggaaaaacaaacttgattttgaaattaaattattaaataatgtaatggaa
gtcatgaaagaatctatacaaaagttcatatatcagaaacacgttgaaatgctgaaaata
ttttatagagtacaaaagaaagctctcttatgtgtttatccagaaatacgaaatgacgat
gaagtaaatgatacttatttatattttagaacttctgtagacgaaaatgtactagaacta
tataaagaaatagaaaatttcaaaagttcccatcggaaatgtggagaaaattttaatgca
tattttccatatcctgttgaattagattcatatatgccaaatcttatgatctccaacaca
gacagagaagattatctcaatgcattacgatatttatattcaaatccttatcctagggaa
catttattgcaaatagcaagttttgtgacattcattgatgagcctaaaaagtatgattta
atacaaaaattaaaaagtttaaacaactcttcagttaatgaattgttaacagtaatacaa
agtgaattatctaagaaggaatcaaataaaaatgaaagtaaagaacaggaagacaaatta
ttagaacattttgatagtacaaatcgaggtgaaaacgttattaattcaaaggttgatatt
ttacataagacactagataatattggaaatatgactagtcaagaagagaacgtctctcta
agtgataataaatgcgataaaatgagtaataactatagttttgacaattctatatcaact
gatttaggtttggatgatctttttaaaatacaaaaagttgcacgtcatgaaaattgtaac
ttgactagtagtacatcaagtatattttctagtgaaagtgataccgttaaggaacataga
ttgaatggaaaagtaaatacgaaaaataaatttcgtagacggaaaaagattcagaaacaa
ggagataatactgctaaagaacaatttattatcagatcatctgatagtactgatacgtat
gaaaaacaatatacgtcacaaacgcaatcagatttgtcatctagatcaatgacagatcgg
ttaaattcgtcttttgtagaaacaaatttaagcagaaaaaatagtcagaatattcaagat
atatttaattgtcaagagtcttacgtagataatgaaccacaaagttctgtttctattcct
agaattagtgaacatcgaaagaataattcatgtaatttttctcctacacctttaacaaaa
aatgtttcacagagacatttagataatgaagttacaactgagaaaaccaatatttgtaat
ttacatcaacaaaaatcaaagaatcctgtaaattcacaatattacgctcctttttataat
tatatgcctaatgttccttataatcaagtagaagattatatgtatatgccaggacatttg
tccaggaatatattttcagagaatatatatcattttcctcattcatcaagtgataacctt
aatgaagttgaaattgaccaatttttatcatcattaagagaggaaacaaatcgattgcat
ttagaactttataaatcagaaatgctccgtaatgcaatgaaaaattataattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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