KEGG   Bombus terrestris (buff-tailed bumblebee): 100646901
Entry
100646901         CDS       T04364                                 
Name
(RefSeq) probable ATP-dependent RNA helicase spindle-E
  KO
K18408  ATP-dependent RNA helicase TDRD9 [EC:5.6.2.5]
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:bter00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bter03036]
    100646901
Enzymes [BR:bter01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     100646901
Chromosome and associated proteins [BR:bter03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    100646901
SSDB
Motif
Pfam: Helicase_C TUDOR DEAD HA2_C nSTAND3 HA2_N AAA_19 AAA_11 PhoH ResIII ATPase_2 ATPase AAA_14 Flavi_DEAD AAA_7 NACHT
Other DBs
NCBI-GeneID: 100646901
NCBI-ProteinID: XP_012164035
UniProt: A0A9B2JEG9
Position
LG B05:complement(6088686..6093919)
AA seq 1425 aa
MNTYNLSNFYKGPVILPGPTSRKKRLPSKNVFLPDTNSQREEKGTDYIAEYVQKEEEELL
RAASYHNTNDKCNFENVSVGTYVTEDMQNEQTLNIYKTYQFVYHANPNLVVNSKRDQIVS
MIETNSVVVIQGPTGCGKTTQVPQFILDSCYKKKLHCNIIVTQPRRIAAISIAKRVSQER
QWPIGTLIGYQVGLINHTSKDTRLTYCTAGVLLHKLVNSKNMLDYTHVILDEVHERNEDM
DFLLLVVRKLLYTNSRSVKVILMSATFDVERFAKYFSSPVGNKLVPAPIIDIPKKTFFNV
GIYYLCQMVTLGPIPEVSATKPCITNKMLEFCVNLIKVLDDVDMKADDAKYDSETNLYER
HVILIFLPGINEIEEINNLLCLPKHEQSKWDIVILHSSITSEEQQRIFQKPPHGYRRLIL
STNIAESSITVPDVKYVIDFCLIKHLITDQHTNFSCLELKWASKANCEQRAGRTGRVMDG
RVYRLVPQTFYENVLPQEVSPEILRAPLENLVLKSKLLNMGEPKAILALSLDPPDLRNLE
NTILLLKETGALLNKINEIQPFDGELTDLGRVMANLPLNIHVSKLIMLGHVFSVLKDTII
IAAALSVKDMLNNPFQQKLLAFNVRLNWAANSCSDCVTFMNVYKVWIAEKVNRRLNSDAE
ERKWAMRNFVQIRVLREVKALVTELTRRLEKLGIQESAGVNKVVWTEAERPFILKIVIAG
AFYPNYFINNVSASESKLNEHDGIKLLGGLDPLRTVYLQGWPLKQPGLLYARRIQNIFKE
NLKMSTGKIHVSFDNSSRVYVQFIQGMSEKQHKDVSRGISPFIYKAIRMRHCNIPIEIPI
LHEDMALQRANEMNLKQKFYFTPKSVLKDKIKPELPGLRITRIPLIIQNIKNPSCFWAQQ
RNSTIIKRLNKIESAIEQMQHQFETFKMAPEIGTIVLAPYEENNRKTYLRAVVEGHVSLP
EILVRLFFIDYGYSNECRLRDLKRLKNDSDIFDIPALAFECKLANIRPSVAHNFSEDWSQ
AACDLFWTLINKPGLLFGEIYSVVNSVVVIDLIHKNEEDEISVNQCLLEKSLAIKKEENY
LSRFNHSLRLQQSDMSDEQCYYYEKLQYDQDDMPNIYPDPPAVAECNTSEKLRGPFSPLE
IDLIHLIRAGRDKTVRMAMNSVNSVLLDTDPEDSSQRLLVAASISQSARGQNLTLYNTTL
MPRIPGLTALIVLIFTPYMELRRNDFGTCYIGALCGLGFDPIKKNSIYPEHDIELYFDTE
ITIDDLQFINRLRHWMNIGMQINQQFNSNNNMEEIIVCQNRIKDALFNLIEKERKIQATE
LINNFDKWNLYNEKLLLRPNKQSMITNSIYRLHNALELEEANEIHEIIEHIKNLRVLATE
DPRKTGITQIPCKLCNITVCDIFDLRNHLYTARHRQNEDILGIKL
NT seq 4278 nt   +upstreamnt  +downstreamnt
atgaatacatataatttatctaatttttataaaggaccggtgatattacctggtccaacg
agccggaaaaaacgattaccatctaagaatgtatttttgccagatacaaattctcaaagg
gaagagaaagggacagattatatagcagaatatgtacaaaaagaagaagaagaacttttg
cgggctgcaagttatcataatacaaatgataaatgcaattttgaaaatgtatcagtaggt
acatatgtcacggaagatatgcaaaatgaacaaacattaaacatttacaaaacatatcag
tttgtttatcatgcaaatcctaatttagtagttaatagtaaaagagatcagatagtatct
atgattgaaactaattcagttgtagtaattcaagggccaactggttgcggcaaaactaca
caagtaccacaatttattttagattcctgctataaaaaaaaacttcattgtaatattata
gttacgcagcctagaagaattgctgctataagcattgcaaaacgtgtcagccaagaaaga
cagtggccaataggtacccttattggatatcaagtaggtctgataaaccacacaagtaaa
gatacacgcctaacatattgcactgctggggtacttttacataaattggtaaatagcaaa
aacatgttggattacacacatgtcatacttgatgaagttcatgaaagaaatgaagatatg
gattttcttctccttgttgttcgaaagctattatatacaaattcacgttcagtaaaagtt
attttgatgtctgctacatttgatgtagaaagatttgctaaatatttttcttcacctgtg
ggaaataaacttgttcctgcccctattattgacattccaaagaaaacattttttaatgtt
ggtatctattatctttgtcaaatggttacattaggaccgatacctgaagtttctgctacc
aaaccatgtattacaaataaaatgttggaattttgtgttaatcttataaaagttcttgat
gatgtagacatgaaagctgatgatgcaaagtatgattcagaaacaaatctttatgaaaga
catgtgattctcatatttttaccaggaattaatgagattgaggaaattaataatttgttg
tgtttaccaaaacatgaacagagtaagtgggatatagtgatattacattcctcaattaca
agtgaagaacaacagaggatttttcaaaaaccaccccatggctatcgtcgtcttatctta
tctacaaatattgctgaaagcagtattactgttcctgacgtaaaatatgtaattgatttc
tgtttaataaaacatcttattacggatcaacatacgaatttttcgtgcttagagttaaaa
tgggcaagtaaagcaaattgcgaacaaagagcaggtcgcacaggtcgagtaatggatggt
agagtatatagattagtaccacaaacattttatgagaatgttttgcctcaagaagtatca
cctgaaatattacgagctccattagaaaatctagttctcaaatcaaagttgttaaacatg
ggagaacctaaagctattttagcactttctcttgatccacctgatcttagaaatttagaa
aacacgatactattattaaaggaaacaggagcattgctaaataagatcaatgaaatacaa
ccttttgatggagaattaacagatctgggtcgagttatggctaatctaccactaaatatc
catgtatcgaaattaattatgttaggtcacgtttttagtgttttaaaagatacaataatt
atcgcagctgctttgtctgtaaaagatatgcttaataatccatttcaacaaaaactgtta
gccttcaatgtcagacttaattgggcagctaattcttgcagtgactgtgtaactttcatg
aatgtatataaggtatggattgccgaaaaagttaatcgtcgattaaatagtgacgcagaa
gaaagaaagtgggcaatgagaaattttgtacaaatcagagtgttgcgcgaagttaaagcg
ctggtaacagaattaacgcgtagattagaaaaattaggtatacaagaaagtgccggtgtt
aataaagttgtttggacagaagcagaacggccatttattttaaaaatcgtaattgctggt
gcattttatccgaattactttatcaataatgtatcagcatcagaaagtaaattgaatgaa
catgatggaataaaattactaggtggtttagatcccttgaggacagtatatttacaaggt
tggcctttgaaacaacctggactattatatgcccgcagaattcagaatatcttcaaggag
aatttgaagatgtctactggaaaaatacatgtatcttttgacaattcttctcgcgtttac
gttcagttcattcaaggaatgtctgaaaaacaacataaagatgtatcaaggggaatatct
ccatttatttataaagcaatcagaatgagacattgcaatatccccatagagataccaatt
ttacatgaagatatggctttgcaacgagcaaatgagatgaatttaaagcaaaaattctat
tttactcctaaaagtgtgttaaaggacaaaattaaacctgaattaccgggtttacgaata
actcgcattcctctaattatacaaaacattaaaaatcctagttgtttttgggctcaacaa
cgtaattctacaattataaaaagactgaataaaatagaatcagctattgaacaaatgcaa
catcaatttgaaacattcaaaatggctccggaaattggcacaattgtacttgctccatat
gaagaaaacaatcgcaaaacatatcttcgggcagtagtggaaggtcatgtatcattacca
gaaatattagtacgactattttttattgattatggttattcaaatgaatgtcgattgcgc
gatttaaaacgtttgaagaatgatagcgatatttttgatattcctgcgttagcgttcgaa
tgtaaattagcaaacattcgaccatctgtagcacataatttcagtgaagattggtcacag
gctgcatgtgatctattctggacattaattaataaacctggtttactttttggagaaatt
tattctgttgtcaatagcgttgttgtgattgacttaatccataaaaatgaagaagacgaa
attagtgtaaatcagtgtcttcttgaaaaatcacttgcaataaaaaaagaggaaaattat
ttgtcacggtttaatcatagtttaagattgcaacaatcagatatgtcggatgaacaatgt
tattactatgaaaagttacagtatgatcaagacgatatgcccaatatctatccagatcct
cctgcagttgcagaatgcaacacatcagaaaaattacgaggtccattttcaccacttgaa
attgatttaattcatcttattagggctggtagagataaaactgtgagaatggcgatgaat
tcggtgaattctgttcttttggacaccgatcctgaagattcttctcaacgacttttagta
gcagcatccatttctcaaagtgcacgtggtcaaaatttaacattatataatacaacatta
atgccgcgtattcctggtttaactgccttaattgtattgatttttacgccttatatggaa
ttgcgacgcaatgattttggaacctgttatattggcgcattatgtggattaggttttgat
cctattaaaaagaatagtatttatccggaacacgatatagaactttattttgacaccgaa
attactatagatgatttacaatttataaatagactacgtcattggatgaatattggaatg
caaattaatcaacaatttaatagcaataacaatatggaagaaattattgtctgtcagaat
agaataaaagatgcattgtttaacttaattgagaaagaaagaaagattcaagctacagaa
ttaattaataattttgataaatggaacttgtataatgaaaagctgttgcttcggcctaat
aaacaatccatgatcactaatagcatatacagactccataatgcattagaattggaagaa
gcaaatgaaatacatgaaattatagaacatataaaaaatttacgagtattggcaactgaa
gatccaaggaaaactggaattactcaaattccttgtaaattatgtaacattacagtttgt
gatatatttgaccttcgcaatcatttgtacacagcgagacacaggcaaaacgaagatata
ttaggaattaaactttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (34)   

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