KEGG   Bombus terrestris (buff-tailed bumblebee): 100649253
Entry
100649253         CDS       T04364                                 
Name
(RefSeq) fibril-forming collagen alpha chain
  KO
K19719  collagen type II alpha
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:bter00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100649253
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:bter00536]
    100649253
Glycosaminoglycan binding proteins [BR:bter00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100649253
SSDB
Motif
Pfam: Collagen COLFI PBP1_TM
Other DBs
NCBI-GeneID: 100649253
NCBI-ProteinID: XP_012176731
UniProt: A0A9B2K0X9
Position
LG B04:1672446..1683671
AA seq 1508 aa
MGPKALRLAAAFAVIQLLLPQVHSIRTKLRKQRSKPLQAQQAANGDYDYDYYEGYDDYDD
RNETTTTTAPSPPVTSSVNTASRGELPTETLQTFYRPGLSTDVPTQATIRTFSQVGILPN
EVQTTPEQNHASPTEIVPGESNVISAVAVPGPRGEPGRPGDMGRPGDAGFPGHPGSPGIP
GPPGPPGPIPDVSMYYQQLALSQANQDKGPTGAAAPLYGPEAYLQMQTGPIGPRGPSGPP
GPPGPQGFQGVRGEPGEPGTLGPPGAPGPRGLAGLPGKDGNTGEDGEPGPPGSVGPVGPR
GLPGMPGLPGVKGHRGFPGLDGAKGEQGVSGEKGSMGVPGPMGHVGPMGPAGPRGERGRE
GPPGPPGIRGVDGIAGPPGQPGTVGKPGSPGFPGSPGVKGDQGAQGPKGSQGIQGPRGET
GRPGQPGESGPQGPQGKDGIPGEKGSTGATGLVGAPGFPGARGQPGIPGNPGVPGAKGMP
GLSGERGFKGDSGAKGDSGSPGPRGLPGPPGNEGKRGKRGMRGPIGTSGPAGERGAPGAP
GLPGPDGPIGPKGQSGDRGPIGPMGLRGANGDPGRPGSPGLQGTRGLMGRPGAPGKPGNP
GDRGIQGADGKPGEQGPAGLQGLPGPIGLPGEKGYPGEPGKAGEPGNPGPPGPRGDTGKE
GAPGPQGSPGPSGVDGERGPPGSPGPRGFQGFPGVTGNPGTPGKDGESGVQGPPGPPGIP
GNRGERGFPGERGTPGGPGLTGPRGEPGAQGLDGPPGLPGAKGDRGISGPPGLVGLPGLR
GATGESGQKGERGSSGPPGPEGPSGRIGERGPQGQIGSPGPPGEPAERGDPGLPGPPGEV
GAPGNPGERGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNPGLPGSPGETGPQ
GLVGLTGAKGVRGEPGARGEPGIMGPPGVPGIVGAMGPPGAIGPSGPPGLPGSKGNIGET
GRAGNPGPIGNPGSPGADGNKGESGSQGPPGTPGPQGPQGSPGERGLPGLPGPSGPIGAR
GIRGAPGESGVPGKPGPEGPPGPPGQVGPIGPHGPTGEIGAEGPSGKPGPPGIAGRPGDK
GPPGAVGQTGLPGSPGLPGPPGQAGAPGSTGERGPKGETGPQGVEGQQGPRGKPGPIGLE
GPKGDRGEEGQKGAKGHRGFTGLQGLPGPTGLPGEKGIPGLPGLPGKDGESGPRGSPGRD
GSPGPIGLTGNPGPKGPSGEEGRHGPPGPPGPPGPPGPPGELGLGYDAASLAALLGQGQT
KGPDPLVGDEPPRMFSQDMTEEERKELILKAYKQLKSSFQKFVKPDGGKSSPAKTCRDLY
TAYPDKLSGEYWIDPNEGDTRDAILVYCDAKKRATCLLPNPVRSPEINYITDQPETWLSE
IENGMKITYKADSNQIGFLQLLSKHAYQNIIYHCKNSIGYFDSERKTYRKGMKFLTWNDV
ELTPRGNQRLRYEMITDECRTYNGQWGKTVISYETDKPVRLPIIDVALRDIGKPDQSFSI
EIGTVCYE
NT seq 4527 nt   +upstreamnt  +downstreamnt
atggggccgaaggcccttcggttagccgcggcgttcgccgttatccaacttcttttgccg
caggttcattccatacggaccaaactcaggaaacaacggtccaagccgctgcaagctcaa
caagccgcgaatggtgattacgattacgactattacgagggttacgatgactacgatgat
agaaatgaaactacaactacaactgcgccatcaccacctgttacatccagcgtcaatact
gcaagcaggggtgaattaccgacagagacattgcaaactttctacagacctggactgtct
acagatgtaccaacgcaagcgacaattcgaactttcagtcaagtcggtatattaccaaac
gaagtgcaaacaacaccagaacaaaatcatgcatcaccgacagagattgttcctggtgaa
agtaacgtgattagcgcggtcgctgttcctggacccaggggcgagcctggtcgacctgga
gatatgggtcgtccgggagatgctggatttccaggacaccctggatctccgggaattcca
ggacctccggggccaccaggacctatacctgacgtatcaatgtattatcagcaattagct
ttatctcaagcaaatcaagataaaggaccgacgggagcagcagcacctttgtatggtcca
gaagcctatttacaaatgcaaactggtcctattggaccgcgtggtccatcaggtccacct
ggaccacctggaccacagggttttcaaggagtacgaggagaacctggtgaacctggaact
ttgggtcctccaggagcgccaggtcccagaggattagctggtttaccgggaaaggatggt
aataccggtgaagatggagaacctggtcctccaggatcggttggtccagtcggaccaaga
ggtctaccagggatgcctggtcttcctggtgtaaaaggacaccgaggttttccggggtta
gatggtgcaaaaggagaacaaggtgtatctggtgagaaaggatccatgggcgtacctgga
ccgatgggacatgtaggcccgatgggccctgcaggtccacgtggtgaaagaggtagagaa
ggtcctcctggacctccaggaattagaggggtggatggtattgctggaccccctggtcag
cctggtacggtaggtaagccaggttctcctggatttccaggtagtccaggtgtaaaagga
gatcaaggagcacaaggaccaaaaggaagccaaggcatacaaggccctcgaggtgaaact
ggccgtcctggtcaacctggtgaatcaggaccacagggaccccagggaaaagatggaata
cctggagaaaagggaagtacaggagcaactggtttagttggtgctccaggtttccctgga
gctcgcggacaacctgggatacctggcaatcctggtgttccaggagcgaaaggcatgcct
ggactttcaggtgaaagaggatttaaaggtgatagtggagctaaaggtgattcgggaagt
ccagggccacgtggtttgcctggtcctcctgggaacgagggtaaacgaggaaaaagggga
atgcgcggaccaattggtacatccggtcctgccggagaacgtggagcaccaggcgcaccg
ggtcttccgggacctgatggccccataggacccaaaggtcagtctggagatcgtggacca
attggaccaatggggctcagaggagctaacggagatcctggtcgcccaggatctcccggt
ttacagggtacacgtggtttaatgggtcgccctggtgctcccggaaaaccaggaaaccca
ggagaccgaggaattcaaggtgctgatggaaaaccaggtgaacaaggtccagctggatta
caaggtttacctggtccaataggtctcccaggagaaaagggatatccgggtgaaccagga
aaagctggtgagccaggaaatcctggaccacctggtcctagaggtgatacgggaaaggaa
ggagcaccaggacctcaaggttcacctggaccatcaggagtagatggtgaacggggacct
ccaggatctccaggtcctagaggttttcagggttttccaggcgttactggtaatccagga
acaccaggaaaagatggagaatcaggtgttcaaggaccacctggtccaccaggtatacct
ggaaatagaggtgaacgaggatttcctggtgaaagaggtacaccaggaggaccaggatta
acaggaccaagaggagaaccaggcgcacaaggattagatggacctcccggattacctgga
gcaaaaggagatcgaggaatttcaggtccacctggattggtaggattgcctggcttacga
ggagctacgggagagtcaggtcagaaaggagaaagaggatctagtggaccgcctggccct
gaaggaccttcaggacggattggagagcgtggaccacaaggtcaaattggctcaccggga
ccgccaggtgaaccagcagaacgaggcgatcctggattacctgggcctccaggagaggta
ggtgctcctggaaatccaggagaaagaggaccccaaggattacaaggactgcaaggtttc
ccaggaccacaaggactcattggtttaccaggattaaagggtgatcgtggttatccaggt
ttaaaaggagatcaaggaaatcctggcctacctggtagcccaggtgaaactggaccacaa
ggtttagttggtttgacgggagctaaaggagtacgaggagaaccaggcgctagaggagag
cctggtattatgggaccaccaggagtaccaggaatcgttggtgcaatgggccctccaggg
gcaataggaccatcaggaccacctgggttaccaggtagtaaaggtaatattggagaaaca
ggacgagccggaaatcctggacctattgggaatccaggttcacctggtgcagatggaaat
aaaggcgagagtggttctcaaggaccaccaggtactcctggtcctcaaggtcctcaaggc
tctcctggcgaaagaggattacctggtttaccaggtccgtctggaccaataggcgccaga
ggaatacgaggagcacctggtgaatctggtgtacctgggaaacctggaccagaaggtcca
cctggacctcctggacaagttggaccaattggaccacatggaccaacaggagaaattgga
gcagaagggcccagtggtaaacctggaccacctggaatagcaggtcgtcctggagataaa
ggaccaccgggagcggtaggacaaacgggattgcccggctctcctggtttacccggacca
cctggtcaagcaggtgctccaggatcaactggagaaagaggaccaaagggagaaacagga
ccacaaggtgtagaaggacagcaaggacctagaggaaaaccagggcctataggattggaa
ggtcctaaaggtgatcgcggagaagaaggccagaagggtgcgaaaggccatcgaggattt
actggtttacaaggtttacccgggcctactggtctaccaggggaaaaaggaatacctgga
cttcctgggctacctggaaaagatggcgaatctggacctagaggtagtcctggacgagat
ggcagccctgggccaattggattaactggcaatccaggaccaaaaggtccttcaggtgaa
gaaggtcgccatggaccaccaggtcctcctggtcctccagggcctccaggtccacctggt
gaacttggattaggatatgatgctgcttctttagctgcacttttaggacaaggtcaaact
aaaggaccagatccattagttggtgatgaaccacctagaatgtttagtcaagacatgaca
gaagaagaaaggaaagaactcattttgaaagcatataaacaattgaaatcatcattccag
aaatttgtaaaaccagatggtggaaaaagttcaccagccaaaacttgcagggacctttat
actgcttatccagataaactttctggagaatattggattgatcctaatgaaggtgataca
agagatgcaattttagtgtattgtgatgctaagaaacgtgcaacatgcttattacctaat
cctgtacgttccccagaaattaactatattactgatcaaccagaaacttggttaagcgaa
atagaaaatggaatgaagattacatataaagcagatagtaatcaaattggctttttgcaa
cttctatcgaaacatgcataccaaaatataatatatcactgtaaaaatagcataggctat
tttgattctgagcgaaagacgtatagaaaaggtatgaaatttttaacctggaatgatgta
gaattaacaccacgtggaaatcaacgtctaagatatgaaatgataactgatgaatgtaga
acatataatggacaatggggtaaaacagtaatttcatatgaaactgataaacctgtaaga
ctacctataatagatgtggccttacgagatattggaaaaccagatcaaagcttttctatt
gaaatcggtactgtttgttatgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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