KEGG   Clostridium botulinum F Langeland: CLI_3514
Entry
CLI_3514          CDS       T00563                                 
Name
(GenBank) putative helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cbf  Clostridium botulinum F Langeland
Pathway
cbf03420  Nucleotide excision repair
cbf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLI_3514
   03430 Mismatch repair
    CLI_3514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbf03400]
    CLI_3514
Enzymes [BR:cbf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLI_3514
DNA repair and recombination proteins [BR:cbf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLI_3514
   MMR (mismatch excision repair)
    Other MMR factors
     CLI_3514
SSDB
Motif
Pfam: AAA_19 UvrD-helicase DEAD SLFN-g3_helicase Viral_helicase1 AAA_30 AAA_11 T2SSE ResIII UvrD_C_2 NACHT
Other DBs
NCBI-ProteinID: ABS42146
UniProt: A7GIS7
Position
complement(3662406..3664535)
AA seq 709 aa
MDNNQINNSMDKYIELSMEREYLDFIIDKVRKETGIYLDKRKDIVKDIVEYRKEFLEEDK
NDEDKVAEYFDHERYLKEKLYGFTDKKLKELTILEQNPYFGKVNFIDEGDEDSIYIGRYG
FLETGNYKPFIVDWRAPICQIFYQGKLGNIAYESPDGKIEVDVKSKRQYVIRKGILKGMF
DSALDVKDEVLQMILSENTKEKLKDIVMTIQEEQDNLIRQPKDKAMIVNGVAGSGKTTIA
LHRVAYLLYNYRKQIQDKVLILGPNNIFVDYISEVLPSLGENGVKQTTFKDFIEDLLPTN
NFLEYDNYIERFIKKDNEFIEDIAYKQSKSYMEDLDSFMEDLERNIFITEDVILMEEVAI
DKKEIDEMLHCYYKYMPLFKRSRKIKRIVFSKIRDVRNKKVYEIQRQYEEKLKKLSEEEL
QLNKNNLEFERKNNIRNIARKSMELKKSLVWLDNPQVLDIYNEFNNNNKLTVDDIIAILY
LKIKLEGLRYRNEIKHIVIDEAQDYSFLQFVVLKELTDCQSITIVGDVNQRTLPCKDEVP
MLCLDSVFNRVDVEYFNLDKSYRSTKEIIEYANKHLKTNKIVPLVREGDPVKEVTVKNSR
EAIDKVNYYLSYLENKGYENIAIITTTLEQGKVIGSELKKQMYINLIEREDIIYSGGKII
IPSYLSKGLEFDATILILDDNNIGENLKYIMATRALHEMIVVHKEGKKL
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggataataatcagataaataattccatggataaatatatagaactaagtatggaaaga
gaatatttagattttataatagataaagtaagaaaagaaacaggaatatatttagataaa
agaaaagatatagtaaaagatatagtagaatataggaaagaatttttagaagaagataaa
aatgatgaagataaagtagcagagtactttgatcatgaaagatacttaaaagaaaagctt
tatggttttacagataaaaaactaaaagagctcacaattttagaacagaatccttacttt
ggaaaagttaattttatagatgaaggggatgaagattctatctatataggtagatacgga
tttttagaaacaggtaattataagccttttattgtagattggagagctcctatatgccaa
atattttatcaggggaaattaggaaatatagcatatgaatcaccagatggtaaaatagag
gtagatgtaaaatctaaaaggcaatatgttatccgtaagggtatattaaaaggtatgttt
gattctgctttagatgtaaaagatgaagttcttcaaatgattttaagtgaaaataccaaa
gaaaaattaaaggatatagttatgactatacaagaagagcaagataacttaattagacaa
cctaaagacaaagctatgattgttaatggagttgcaggtagtggtaagactaccattgct
cttcatagagtagcatacttattatataattataggaaacaaatacaagataaagtacta
atactaggacctaataatattttcgtggattatatatcagaagtgttaccgagtctaggt
gaaaatggagttaaacaaactacctttaaggattttatagaagacttgctacctacaaat
aatttcctagaatatgataactatatagaaagatttataaaaaaagataatgaatttata
gaagatatagcatataaacaatctaaatcatatatggaagatttagatagctttatggaa
gatctagaacgaaacatatttattacagaagatgtaatattaatggaagaagttgctata
gataaaaaagaaatagacgaaatgcttcactgctattataaatatatgcctttatttaaa
agaagtaggaagataaaaagaatagtattttctaaaataagagatgtgagaaacaaaaaa
gtttatgaaattcaaagacaatatgaagaaaaactaaaaaaattatcagaggaagaacta
caactaaataaaaataatttagagtttgaaagaaaaaataatataagaaacatagcgaga
aaatctatggagttaaagaaatcattagtatggttagataatccacaggttttggatata
tataatgagtttaataataacaataagcttactgtagatgatattatagctatattatat
ttaaaaataaaattagagggtttaagatataggaatgaaataaaacatatagtaatagat
gaagcacaggattattcatttttacagtttgtagtattaaaagaacttacagattgtcaa
tctataactatagtaggagatgttaatcaaagaacattaccttgcaaggatgaagttcct
atgttatgcttagattctgtctttaatagagtcgatgtagagtattttaatttagataaa
agttatagatcaacaaaagagattatagagtacgctaataaacatttaaaaacaaataaa
attgttcctttggtgagagaaggagaccctgtaaaagaagtaacagtgaagaattcaagg
gaagcaatagataaagttaattattatttaagttacttagaaaataaagggtatgaaaat
attgcaattataacaactacactagaacaggggaaagttataggatcagaattaaaaaag
caaatgtatattaatttaatagaaagagaagatataatttattctggaggtaagataata
attccatcttatttatcaaaaggtttagaatttgatgctactattttaatattagatgat
aataatataggagaaaatttaaaatatataatggctacaagagctttacatgaaatgata
gttgtacacaaagaaggtaaaaagttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system