KEGG   Clostridium botulinum B Eklund 17B (NRP): CLL_A3545
Entry
CLL_A3545         CDS       T00696                                 
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cbk  Clostridium botulinum B Eklund 17B (NRP)
Pathway
cbk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLL_A3545 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbk03019]
    CLL_A3545 (rhlE)
Enzymes [BR:cbk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CLL_A3545 (rhlE)
Messenger RNA biogenesis [BR:cbk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CLL_A3545 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 CMS1 AAA_19 AAA_22 Exotox-A_cataly rpo132
Other DBs
NCBI-ProteinID: ACD23664
UniProt: B2TRC4
Position
complement(3754131..3755429)
AA seq 432 aa
MLFKDLNIIEPIQRALTEAGYTNPTPIQEQSIPSLLNGKDFLGCAQTGTGKTAAFAIPVL
QNIAQNQKKSDKPRTIKALILAPTRELAIQIEENFTLYSKHTNIKNTVIFGGVSQKPQTR
ILGEGVDILIATPGRLLDLIDQKYIDLSNVKHFVLDEADRMFDMGMVRDVKKIVAKLPKV
RQNLLFSATMPSEVKSLVNSILKDPVKVEVAPVSSTIDTITQGVYFVTKKDKKSLLVHLL
KDESIKSLLVFSRTKYGANNIVKDLAKTGTESQAIHGNKSQNARQLALSNFKEGKIRVLV
ATDIAARGIDVDGLSHVINYDLPDVPETYVHRIGRTGRAGNSGVAISFCDVDEKSALKDI
EKTIGKNIPVMKNVEFERIAITREPAQRKEADKKTTDANKKPKRNWYGDKRRSQGNGGQQ
GKRQSGRTQQAR
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgttatttaaagatttaaatataatagaaccaattcaaagggctttaacagaagcggga
tatacaaatcctacaccaatacaagaacaatcaattccatcattgttaaatggaaaagat
ttcttaggatgtgcacaaacaggtacaggtaagacagcagcttttgctattcctgtttta
caaaacatagcacaaaatcaaaagaaatcagataaaccaagaacgataaaagctttaata
ttagcaccaactagagaattagcaattcaaatagaagagaattttactctttatagtaag
catactaatattaaaaatacagtaatatttggtggagtatcacaaaaacctcaaactaga
atattaggtgagggagtagatattttaattgcaacgccaggaagattacttgatttaata
gatcaaaaatatattgatttaagcaatgttaagcattttgttttggatgaagctgatcgt
atgtttgatatgggaatggttcgtgatgtaaaaaaaatagtagctaagttaccaaaggtt
agacagaatcttttattttctgcgactatgccttcagaagttaagagcttagtaaacagt
attcttaaagatccagtaaaagttgaagtagcacctgtttcatcaactatagatactatt
actcaaggagtatattttgttacaaagaaagataagaaatctttacttgttcatcttctt
aaagatgaatctattaagtcattattagtattttcaagaacaaaatatggagcaaataat
attgtaaaagatcttgctaagactggaactgagtctcaagcaattcatggtaataagtct
caaaatgcaagacaacttgctttaagcaattttaaagaaggtaaaataagagttttagta
gcaactgatatagctgcaagaggaatagatgtagatggattatctcacgttataaattat
gacttacctgacgtaccagaaacttatgtacatagaattggaagaactggaagagctgga
aatagtggtgtagcaatatcattttgtgatgttgatgaaaaaagtgcacttaaggatatt
gaaaaaacaataggaaaaaacattcctgtaatgaagaatgttgaatttgaaagaatagct
ataactagagaacctgctcaaaggaaagaagcagacaagaagactactgatgctaataaa
aaaccaaaaagaaattggtatggtgataaaagaagaagccaaggcaatggtggtcaacaa
ggaaagagacaaagtggtagaactcagcaagctagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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