KEGG   Cynara cardunculus var. scolymus (artichoke): 112506413
Entry
112506413         CDS       T05604                                 
Name
(RefSeq) eukaryotic initiation factor 4A-15-like
  KO
K03257  translation initiation factor 4A
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112506413
   03012 Translation factors [BR:ccav03012]
    112506413
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112506413
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     112506413
   mRNA cycle factors
    Stress granule specific factors
     112506413
Translation factors [BR:ccav03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    112506413
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112506413
  Exosomal proteins of bladder cancer cells
   112506413
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA_19 CMS1 DUF2780 Flavi_DEAD
Other DBs
NCBI-GeneID: 112506413
NCBI-ProteinID: XP_024966196
Position
LG 2:complement(3734411..3738116)
AA seq 413 aa
MAGVAPEGSQFDARQFDSKMSELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYNVVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRA
DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDNMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVKLDDEKMLADIQKFYNVTVEELPSNVADLI
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggcaggcgttgcaccagaaggatcccaattcgatgctaggcaatttgactccaaaatg
agcgagctgctttcagctgacgggcaagacttctttacatcctatgatgaggtctatgac
agttttgatgccatgggtttacaagagaatcttttgaggggcatatacgcatatggtttt
gaaaaaccatcagcaattcagcagaggggaattgttcccttcaccaagggtcttgatgta
attcaacaagcacaatctggaaccggaaagaccgctactttttgctcgggtatccttcaa
caacttgattataatgtagttgaatgccaggccttggttttagcacctacacgtgagctc
gcacagcagatcgagaaagtcatgcgggctcttggcgactaccttggtgttaaggtccat
gcttgcgtgggtggaaccagtgttcgtgaggaccagcgcatcctctccgctggggtccat
gtggtagttggtactcctgggcgtgtgtttgacatgcttcgcaggcagtcgcttcgtgct
gattacatcaaaatgtttgtgttggatgaagctgatgaaatgctctcgagaggttttaag
gatcagatctacgatatattccagttgttgccgtcaaaggttcaggttggagttttctcc
gcaacgatgccaccagaggctctcgagatcaccaggaagttcatgaacaaaccggtgagg
attcttgtgaagcgtgatgaactcaccttagaaggtattaagcagttctacgtgaacgtt
gaaaaagaagaatggaagctcgagactctttgcgacctttacgagactttagcaatcacc
cagagtgtcatcttcgtgaacacccgaaggaaggtcgactggctgaccgataatatgaga
agccgtgaccacacagtctcggccacacacggagacatggaccagaacacacgagacatc
atcatgcgggaattccgttctggttcttcccgtgttctcatcaccacggatctgttggca
cgtggtatcgatgtccaacaagtttcacttgtgataaactacgatctgccgacacagcct
gaaaactacctccaccgtatcggacgaagtggtcggtttggaagaaagggggtggcgatt
aatttcgtgaagttggatgatgagaagatgctggcggatatccagaaattttacaatgtg
acggtggaggagctgccgtcgaacgttgctgatctgatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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