KEGG   Corynebacterium diphtheriae 31A: CD31A_1025
Entry
CD31A_1025        CDS       T01697                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
cdz  Corynebacterium diphtheriae 31A
Pathway
cdz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CD31A_1025 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdz03019]
    CD31A_1025 (deaD)
   03009 Ribosome biogenesis [BR:cdz03009]
    CD31A_1025 (deaD)
Enzymes [BR:cdz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CD31A_1025 (deaD)
Messenger RNA biogenesis [BR:cdz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CD31A_1025 (deaD)
Ribosome biogenesis [BR:cdz03009]
 Prokaryotic type
  rRNA helicases
   CD31A_1025 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII UvrA_inter CMS1 adh_short Sp-DndD
Other DBs
NCBI-ProteinID: AEX41702
Position
1020705..1022747
AA seq 680 aa
MSITDNATSGENELDIKILSESQDNSQVDEGTTINNDVVADVDDSRVANTSEATDSAQKE
ADSAEKDGFESLGLPDAILKAVAKVGFETPSPIQAQTIPVLMQGHDVMGLAQTGTGKTAA
FALPILSRIDVKKRHPQALILAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQL
SGLRRGAQIIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEMLNMGFQEDVERILEDTPE
DKQVALFSATMPNGIRRLSRDYMKDPHEIQVKSQTRTNTNITQRYLNVAHRNKLDALTRI
LEVTEFEAMIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDIL
VATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRS
IERATNAKLIEMDLPTVDEVNESRKAKFADSITESLEDDQVAIFRSLIKSYAEEHDVPLE
DIAAALATQARAGSEFLMKEPPPEKRRERRDRDDRRGGRDRFDRDDRRGGRDRGSRFERN
DDMQLYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRINIFVDHTLVELPKNMDPSVID
RLSDTRISGQLIHIEKDNGRPPRRNDDGDRGGYRGGDRFDRDDRRGGRGGRDRGGYRGGR
DRNDRGDRGGYRGGRGGYRD
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgagcattaccgataacgccaccagcggcgagaacgagctggacattaagattttgtcg
gaatctcaggataattcgcaggtagacgaaggcaccaccatcaataatgatgtcgttgcc
gatgtagacgactccagggttgcgaacacttctgaggccaccgactccgctcagaaagaa
gcggacagtgcagaaaaagatggattcgagtctctaggtctcccagacgcaatcctgaag
gcagtcgctaaggttggcttcgaaacgccatccccaattcaggcgcagaccattccggtg
ttgatgcaggggcatgacgttatgggcctcgcgcagacaggtacaggtaagacggcggca
ttcgcgttgccaatcttgtcgcgtatcgacgtcaagaagcgccacccacaggcgttgatc
ctcgccccaactcgcgaacttgctttgcaggttgcagactccttccagtccttcgcagat
catttgggcgacatccacgtgctgccaatctatggcggtcaggcttacggcattcagctg
tccggcctgcgccgtggcgcacagatcatcgtgggtactccaggtcgtgtgatcgaccac
ttggagaaaggctccctcgacatttccaacctccgcttcctcgttctggacgaggcagac
gagatgcttaacatgggcttccaggaagacgttgagcgcattttagaggacaccccagag
gacaagcaggttgctttgttctctgccaccatgccaaatggtattcgtcgtttgtcccgt
gactacatgaaggatcctcatgagatccaggtgaagtcgcagacgcgcaccaacacgaac
atcactcagcgttacctcaacgttgcacaccgcaacaagctcgatgccttgactcgtatc
cttgaggtcactgagttcgaagccatgatcatgttcgtgcgtaccaagcatgaaactgaa
gaagtcgctgaaaagcttcgcgcgcgcggattctccgctgccgctatcaacggcgacatc
gctcaggctcagcgtgagcgcaccgtcgaccagctcaaggacggtcgcctcgacatcctc
gttgctaccgacgttgctgcccgtggcctcgacgttgaacgcatcactcacgtgttcaac
tacgacattccaaacgacacggaatcctacgtccaccgcattggtcgtaccggtcgtgca
ggtcgttctggtgaagcaatcttgtttgtcactccacgtgagcgtcgcatgttgcgttcc
atcgagcgtgccaccaacgcaaagctgatcgaaatggatctgccaaccgttgatgaggtc
aatgagtcccgtaaggcaaagtttgctgactccatcaccgagtctcttgaagacgatcag
gtagcaatcttccgtagcctgattaagtcctacgcggaagagcacgatgttccactagaa
gacatcgccgccgcattggctacccaagcacgcgctggttccgaattcttgatgaaggag
ccaccaccagagaagcgccgcgagcgtcgtgaccgcgacgatcgtcgtggcggacgcgac
cgcttcgaccgcgatgaccgacgtggcggccgtgaccgtggctcccgcttcgagcgtaac
gacgacatgcagctctaccgcctagcagttggtaagcgccagcatgttcgccctggtgcc
atcgttggtgctctggcaaacgaaggtggcctgtccaacaaggacttcggtcgcatcaac
atcttcgttgaccacaccttggtcgagttaccaaagaacatggatccaagcgtgatcgat
cgcctcagcgatacccgtatctccggccaattgatccacatcgaaaaggacaatggccga
ccaccacgtcgtaacgacgacggtgaccgcggcggataccgtggcggcgaccgcttcgac
cgcgacgatcgtcgtggtggacgtggcggacgcgaccgcggcggataccgtggcggacgt
gaccgcaacgaccgtggtgatcgcggtggctaccgaggtggccgcggcggataccgcgac
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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