KEGG T00019: CELE

Caenorhabditis elegans (nematode): CELE_Y37A1B.2

Entry

CELE_Y37A1B.2     CDS       T00019

Symbol

lst-4

Name

(RefSeq) Sorting nexin lst-4

K17923

sorting nexin-9/18/33

Organism

cel Caenorhabditis elegans (nematode)

Brite

KEGG Orthology (KO) [BR:cel00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_Y37A1B.2 (lst-4)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cel04990]
    CELE_Y37A1B.2 (lst-4)
Membrane trafficking [BR:cel04131]
Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    CELE_Y37A1B.2 (lst-4)
  Macropinocytosis
   Sorting nexins
    CELE_Y37A1B.2 (lst-4)
Domain-containing proteins not elsewhere classified [BR:cel04990]
Phox homology (PX) domain-containing proteins
  Sorting nexins
   CELE_Y37A1B.2 (lst-4)

SSDB

Motif

Pfam:

BAR_3_WASP_bdg PX SH3_9 SH3_1 SH3_2 DUF2680 Vps5 RhoGEF

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

WormBase:

UniProt:

Position

IV:complement(<14061000..>14069860)

AA seq 564 aa
MAQVKAEYDFQSQPNTGELSISAGEVLTVIRENIDGGWIEGRNVRGSVGLFPESYVTPYQ
ASRPPPVLPPPLPPTSSGPPAASSRPFDDWGGASEVAAPPSYGAQHHHQPTPSVPEVTRS
SYPSQNDDFDDEWTDEDDEQEPTRPNVQSSIGSNSRRDLSRSHSEHGGPDRGSNKVNKNI
NRFSNFVKSGVEAYVIGESKTTSQISERHEVVMNNGIIQWKPIQQYYTCIVDKPKKESKL
KGLKSFIAYSITSSLTNIQVSRRYKHFDWLHEQLSAKYVLIPIPPLPEKQVAGRYEEDLI
DHRKHILQLWVNKICRHPVLSQSEVWLHFISCTDEKDWKNGKRRAEKDEYIGGAFLNCIT
VPHQPLDPNNVDMQVERFQRSVKTSEEAMRVMQERMNMFQKVFAGPVKQNWQKMGSAFKT
LQQSFEIDETVASRRLTEALAYTASEYHEIGQVFDAHTKNDMEPVLENLYSYKGTVQNVP
DIIQVHKQAVQKFRDSEGRLSSAEAEKMKQRIDAMSYTVIAEVQHQTAEKVEDMKSTMGT
YLKKQAMFYQEVATKLTSLAARYD

NT seq 1695 nt +upstreamnt +downstreamnt
atggctcaggtgaaagccgagtatgattttcaaagtcaaccaaacacaggcgaactgtca
atctcggctggcgaagttttgacggttattcgagagaacatcgacggaggatggatagaa
ggtcgaaacgtgcgtggatccgtcggactctttcccgaatcctacgtaactccctatcaa
gcttctcgtccgccaccggtcctaccaccaccactcccaccaacttcaagcggtccacca
gctgcctcatcgcgtccttttgatgattggggaggcgcttcagaagttgctgctccacca
tcctacggagcccaacatcatcatcagccaacgccatctgtaccggaagtcactagatct
tcatatccatcacagaatgatgattttgacgatgaatggacggatgaggatgatgagcag
gaaccaactcggcccaacgttcaatcctcgatcggctcgaactcccgtcgtgacctcagc
cgtagccactcggaacacggtggacctgatcgaggatccaataaggtcaacaagaacatc
aatcgattctcgaattttgtaaagtccggagtcgaagcgtacgtgattggtgaatcaaag
accacctcacagattagtgaacgacatgaagttgtgatgaacaatggaattattcaatgg
aaaccgattcaacagtactacacgtgtatagtggataaaccgaagaaagagtcaaagctg
aaagggctgaagagcttcatcgcatattcgattacgtcgagtttgactaatattcaggta
tcccgtcgctacaagcatttcgattggctccacgagcagctatcggctaaatatgtgctc
attccgattccaccgttgccagagaaacaggtcgccggaagatacgaggaggatcttatt
gatcatcggaagcacattcttcagttatgggtcaacaagatttgtaggcatccagtgttg
agtcagtcggaagtttggctccactttatcagttgcaccgacgaaaaagattggaagaat
gggaagcggcgagctgaaaaggatgaatacattggtggagctttcctgaactgtatcact
gttccacatcaaccattggatccgaataatgtcgatatgcaagttgaacgattccaacgg
agcgtcaaaacatcggaagaagcgatgcgtgtgatgcaggagagaatgaacatgttccag
aaggtcttcgctggaccggtaaaacaaaattggcaaaagatgggaagcgcgttcaagaca
cttcagcaatcttttgagattgatgagaccgttgccagtcgccgcctgacagaagctctc
gcctacactgcatcagaatatcatgaaattgggcaagtattcgatgcgcacacgaagaat
gacatggaaccagtgcttgagaacctttattcgtataagggaacagtgcaaaatgtgccg
gatattattcaagtgcacaagcaagctgttcaaaagttccgtgacagcgaaggacgtctc
tcgtcggccgaggctgaaaagatgaagcaaagaatcgatgcgatgagctacactgtaatt
gctgaagttcaacatcaaacagcagagaaagtggaggatatgaaatcgacaatgggcaca
tatttgaagaaacaagcaatgttttatcaggaagtggcgaccaagctgacttcattagcc
gctagatatgattga

All links

Gene (27)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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