KEGG   Camponotus floridanus (Florida carpenter ant): 105257748
Entry
105257748         CDS       T03919                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cfo03009]
    105257748
Enzymes [BR:cfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105257748
Ribosome biogenesis [BR:cfo03009]
 Eukaryotic type
  90S particles
   Helicases
    105257748
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA HEM4 NACHT AAA_19 Flavi_DEAD PBP-Tp47_a
Other DBs
NCBI-GeneID: 105257748
NCBI-ProteinID: XP_011266887
Position
Unknown
AA seq 560 aa
MDAHDLFKKLSAGAKFDIKRFRHDAEKFRMVKSSKNDVIIKKEKIDDELLKPDNNVKRKR
LKDENEDVDGITLLNELSVATDGSTESVKKRKKVATADKILKLEQEKINQMRNVNRISVT
GSHVPKLILEFDELRTSYQVPINLLKNMTDSGYILPTPIQMQAMPIMLEGRQILACAPTG
SGKTAAFLVPIIHSLRGPQKKGFRAVILSPTRELAKQTYRECLKLSDGYDFRIHIIGKIN
QALTKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDEADKLFEEGIRGFR
EQLDEITRACTNTNLHRGMFSATNTPAVSKWCRRNMKGLITVTVGHRNAATDMVDQEILF
VGSERGKLLAFRNMIQKGISPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTTTQRD
NIVRCFREGQIWVLICTELMSRGIDFKGVNLVINYDFPPSAISYIHRIGRTGRAGHRGKA
ITFFTRQDTLNLRSIAALMRASGCDVPDYMLAMKKHSKKERRKLERTAPAREKILTVPTY
KQRKRKSHEITKKSKLEKEM
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggatgctcacgatctttttaaaaaactctcagccggcgcaaaattcgatataaaacgc
tttcgacatgatgcagaaaaatttcggatggtgaaatcgagcaaaaatgacgtgatcatt
aaaaaagaaaagatagacgatgaattattaaagcctgataataacgtaaaacgaaaacgt
ctcaaggatgaaaacgaagatgttgatggaataacattattaaatgaattgtcagtagcg
acagatggaagtacagagtcagttaaaaaacgtaaaaaggtggcaactgcggacaaaata
ttgaagctagaacaagaaaagataaatcaaatgagaaatgtgaatcgcatttcagtcaca
ggtagtcatgtacctaaattaatattagaatttgatgaattaagaacaagttatcaagtg
ccaataaacttgttaaagaatatgacagacagtggatatatattgccaacaccaatacaa
atgcaagcaatgccaattatgttggagggcagacaaatactggcttgtgctccaacaggc
tcagggaaaactgcggcatttctagtacctatcattcatagtttgcggggaccacaaaaa
aaaggttttcgtgctgttattttaagtcctacgagagagttagccaaacagacatataga
gaatgcctaaaattgagtgatggttatgattttagaattcacataattggtaaaataaat
caggctcttaccaaatatggaccttcaagttcgcaaaagtttgatattttaattaccaca
ccaaagcgattagttttccttttaaatcaagatcctccagccatctcattaaacaatgta
gaatggttgattgtggatgaagctgataagctttttgaagaaggaatacgcggatttagg
gaacaattagatgagattacaagagcttgcactaatacaaatttacatcggggtatgttt
agtgcgaccaacactcctgcagtttcaaaatggtgccgccgtaatatgaaaggactcata
acagtaacagtcggacacagaaatgcagctacagatatggtagatcaagaaatcttgttt
gttggcagtgaaagaggtaaattgctggcatttagaaatatgattcagaagggtatatca
ccaccagttttggtatttgtgcaaagtaaagagcgggctcaagaacttttcaatgagctt
atatatgatggaattaacgtagacgttatacacgccgataggacgacgacccagcgagac
aatatcgtacgttgctttagagaaggacagatttgggtcttgatctgtacagaactaatg
agcagaggtatagactttaaaggtgtaaatctcgttataaattatgatttcccgccgtcc
gccatctcttacattcacagaataggtcgtaccggccgtgccggtcacaggggaaaggct
ataacgttctttactcgccaggatacattgaacttacgaagtatcgcggcgcttatgcga
gcgtccggatgcgatgtaccggattatatgttggctatgaagaaacacagtaagaaagaa
cggcgcaagctcgagcgtacggcacctgcacgagaaaagatattaactgttcctacgtat
aagcaacgtaagcggaaatcacatgaaattacaaagaaatcaaagcttgaaaaggaaatg
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system