KEGG   Citrus x clementina (clementine): CICLE_v10004283mg
Entry
CICLE_v10004283mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K18422  helicase MOV-10 [EC:5.6.2.5]
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10004283mg
   03036 Chromosome and associated proteins [BR:cic03036]
    CICLE_v10004283mg
Enzymes [BR:cic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     CICLE_v10004283mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     CICLE_v10004283mg
Chromosome and associated proteins [BR:cic03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     CICLE_v10004283mg
SSDB
Motif
Pfam: AAA_12 AAA_11 MOV-10_beta-barrel AAA_30 AAA_19 ResIII AAA_22 UvrD-helicase Mov-10_helical ATPase_2 AAA_16 Helicase_RecD AAA DEAD SLFN-g3_helicase UvrD_C FR47 AAA_7 LTD Mg_chelatase
Other DBs
NCBI-GeneID: 18032492
NCBI-ProteinID: XP_006419983
UniProt: V4RH06
Position
Unknown
AA seq 874 aa
MMDTVGDDNWGNEWEKRDIGFIDFEDYKSECSYNPSEEDPVQISFPFPFIDGKPQSVSVG
ETAVESITIKNTTREPVELWSKIYASTPENTFTLSVMKPPSPGSDSGTNRGFVEFFTLEE
RMIQPGQTLTIWLSCKPKGIGLHTTVLQFDVEDRIERVAFLLAEDKISQSLASKRPYSRG
GRKKQFSVDKYVVGSRPARYRGQIYQNRLPRYDIPNDIRELIERKQIPDAITDGLTLKNY
TSFFKTLLIMEEIQLKEDMRAYDMENVTLMRKGLYLSLVVPGLAERRPSLVNGDFIFAKH
AYEDTSSAYQGFIHRVEADEVHLKFASDFHLNHRDENLYNVQFTYNRVNMRRLYQATDAA
QELDTEFLFPSESSGIRLIESNTLVPISCNLNEEQMCSIEKILGLKGAPPYLIYGPPGTG
KTMTLVEAILQLYATREDARLLVCAPSNSAADHLLEKILGEKAVEVRENEIFRLNAPSRP
YEDVNADHIRFCFFDEQIFKCPPLAALVCYRIIISTYMSASLIYAEGVDRGHFSHIFLDE
AGQASEPESMVPISSYCKKDTVVVLAGDPMQLGPVIYSREAETYGMGKSYLERLFECEPY
CHGNENYVTKLVRNYRSHPQILHLPSKLFYEEELIACKDESISCTAYLNFLPNKEFPVLF
FGIQGCDEREGSNPSWFNRIEVSKVVEIIQKLTSTGNLSEEDIGVITPYRQQVLKLNKAL
ESLYMPDIKVGSVEQFQGQERQVIIVSTVRSTIKHNDFDRKHCLGFLSNPRRFNVAVTRA
ISLLIIIGNPHIVSKDPYWHQLLWYCSDNNSYQGCALPEREEFADEDPTAAECWNHEEEI
PQSFQEDNWNQEPFQAENLKPVKDEDEWSDGWHL
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgatggatactgttggtgatgataactggggcaatgaatgggaaaagagggatattggt
tttattgatttcgaggattataaatcggagtgtagttacaatccaagtgaagaggatccc
gttcaaatttctttcccattcccttttatagatgggaagcctcaatctgtatctgttggg
gaaactgctgtagagtcaatcaccattaagaacaccacccgtgaacctgtggagctttgg
agtaaaatttatgcctcaactcctgagaatactttcactctctctgtgatgaagcctcca
tccccagggtcagattcaggtactaacaggggttttgtggagttttttacgttggaggaa
cgaatgatccagcctggtcagaccttaaccatctggttatcttgcaagcccaagggaatt
ggactgcacacgacagttttgcaatttgatgtggaagataggatagaacgagtggctttt
ttattggctgaagataagatctcacagtctttggcttcaaaaaggccttattcaaggggt
ggaaggaaaaagcaattttctgtggataaatatgttgtgggttcacgtcctgcaaggtac
agaggccagatatatcaaaataggcttcctcgatatgatattccaaacgatattagagaa
ttgattgagcgcaagcaaatcccagatgctattacagatggacttacactgaagaattat
acttcttttttcaagacattattgatcatggaagaaattcaactgaaggaagacatgagg
gcttatgacatggagaatgttaccttgatgagaaaggggctatatttgtcccttgtggtt
ccagggcttgctgagagaagaccctctcttgtcaatggagactttatttttgccaagcat
gcttatgaagatacatcatctgcttatcagggttttatccaccgtgttgaggcagatgaa
gtgcatttgaagtttgcctcagattttcacttaaatcaccgagatgagaatctttacaat
gtacagttcacatacaatcgagtaaacatgagaaggttatatcaagccactgatgctgca
caggagttagacacagaattcctttttccatctgagtcctctggaattagattaattgag
tcgaatacattggtacctatttcctgtaaccttaacgaggagcagatgtgttcaattgaa
aagatccttggcttgaaaggagcacctccttatctgatttatggacctccaggtacgggg
aagactatgacactggtcgaggcaatccttcaactctacgcaactcgagaagatgctcgg
cttcttgtctgtgcaccttcaaatagtgcagctgatcatttgctggagaaaatcctgggc
gagaaggctgttgaagttcgggagaatgagatattcaggcttaatgcaccttctcgtcca
tacgaggatgtcaatgctgatcatattcgcttttgcttttttgatgagcaaatcttcaaa
tgtcctccgcttgctgctcttgtttgctacaggatcataatatcaacttatatgagtgct
tctcttatttatgctgaaggtgttgatcgtggtcacttctcccatattttcttggatgag
gctggccaagcttctgagccagaaagcatggttcccatatcatcttactgcaaaaaggac
actgtcgttgttcttgctggggacccgatgcaattaggtccagtaatatactccagggaa
gcagagacttacggaatggggaaatcatacttagaaaggctgtttgaatgtgaaccttat
tgccatgggaatgaaaattatgtaacgaaattggttagaaattaccgatctcacccacaa
attttgcatctcccttcaaagctattctacgaagaggaactgattgcatgtaaagatgaa
tctatttcctgcacagcctatctgaactttcttcctaacaaggaattccctgttcttttc
tttggtattcaaggctgtgatgagagagaaggcagtaatccttcatggttcaatcggatt
gaagttagcaaggttgtagagatcatccagaaattgacatcaactggaaatctgagtgag
gaagacattggggtcataacaccatacagacagcaggtactgaagttaaacaaggccctc
gaaagcttgtatatgcctgatataaaggttggcagtgttgaacagttccaaggacaggaa
agacaagtcatcattgtatctactgtccggtcaacaatcaaacacaatgattttgacaga
aaacactgtttaggatttctgagcaatccaagaaggtttaatgtggctgttacccgggcc
atatctttgcttatcattattgggaatccacacattgttagtaaggacccatactggcat
cagcttttatggtattgttcagacaacaattcttatcagggctgtgctctccctgaaagg
gaggagtttgctgatgaagatccaacagcggctgaatgctggaatcatgaagaagaaatt
ccacaatcgtttcaagaagataattggaatcaagagccctttcaagcagaaaatcttaaa
cctgttaaagatgaagatgagtggtctgatggctggcatctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (20)   
   Pfam (20)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system