KEGG   Citrus sinensis (Valencia orange): 102614699
Entry
102614699         CDS       T02983                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 5
  KO
K14811  ATP-dependent RNA helicase DBP3 [EC:5.6.2.7]
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cit03009]
    102614699
Enzymes [BR:cit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102614699
Ribosome biogenesis [BR:cit03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    102614699
SSDB
Motif
Pfam: DEAD Helicase_C ERCC3_RAD25_C CMS1
Other DBs
NCBI-GeneID: 102614699
NCBI-ProteinID: XP_052297785
Position
5:join(19777818..19778430,19778504..19778631,19779218..19779325,19780193..19780273,19780951..19781029,19781622..19781707,19781808..19781864,19781958..19782025,19783020..19783088,19783250..19783343,19783644..19783808,19784452..19784544,19784704..19784799)
AA seq 578 aa
MGGKMKDATLLSEPTNNNATTQQIESNKKKKNKKNKHKEIEAEEEEEQQNELNLKRKLEA
IETANGAEKKNNKEKKEKRKQEKELEEIEISEQSHDDDDGGHKKKQKKKKNKEDRDKANG
KESENGDDETISFFKEEDDGQVVVTGKDVKEAKYKALKSFTESKLPDDVLGCCKNFKNPS
PIQSHAWPFLLNGRDFIGIAKTGSGKTIAFGVPAMMHVLSNRKGKPVGKRVNPLCLVLSP
TRELADQIYDVLNDAGKPCGVKSVCVYGGTSKQPQITALQSGVDIVIGTPGRLIDLIEMN
VCHLSEVSFVVLDEADRMLDMGFEEPVRFILSKISLARQMVMFSATWPIEVHKLAQEYMD
PNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDQRLLALLEKYHKSQRNRVLVFALYQLEA
DRLENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVI
NYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKF
GTHVKKKESKLYGAHFREISADAPKAKKITFNNSDDED
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgggtggaaaaatgaaagatgcaacactgctcagcgaacccacaaacaacaacgccacc
acccaacaaatcgaaagcaataagaaaaagaagaacaagaagaacaaacacaaagagatt
gaagcagaagaagaagaagaacaacaaaatgaactgaatctaaaacgaaagcttgaagca
attgaaactgccaatggagctgaaaagaaaaataataaggagaagaaggagaagaggaag
caggagaaagagctcgaagaaattgagatatcagaacagagccacgatgatgatgatggt
gggcataagaagaagcaaaagaagaagaagaacaaggaagatagagataaggcaaatggt
aaagaaagtgaaaatggtgacgatgaaacgattagcttttttaaagaagaggatgatggg
caagtagtggttactggaaaggatgtgaaagaagctaaatataaggcattgaaatcgttt
actgagtctaagcttcctgatgacgtattgggttgctgcaagaattttaagaatccatct
ccgattcagtctcatgcgtggcctttcttattgaacggtcgtgattttatagggattgca
aagaccggctctggtaagacaatagcatttggggtgccggcaatgatgcatgtgttgagt
aaccgaaaggggaagccggtggggaagagggtgaatccgctttgccttgtgctttcaccc
accagagaattggctgaccaaatttatgatgttttgaacgatgctgggaaaccttgtggt
gtgaagtctgtttgtgtgtatggaggaacctcgaaacaacctcagattacagccttacag
tctggtgttgacattgtgattggaacacctggtcgtttgatagatttgattgaaatgaat
gtctgccacctttcggaggtttcttttgtggtccttgatgaagcagatcggatgcttgat
atgggattcgaagagccagttcgctttatattaagcaagatatctttggctcgccagatg
gtaatgttcagtgctacgtggcctatagaagttcataagttagctcaagagtacatggat
cctaatcctgttaaggtggtagttggttcagaggatttggctgccaaccatgatgttatg
caaattgttgaggtcttagatgatcgttcacgtgatcagcgtttgcttgcattgctagaa
aaatatcacaaatcacaaaggaacagagtattagtttttgccttgtaccagctggaagct
gatcgtcttgaaaatatgctgcggcgaagtggttggaaggtcgttgcaatacatggtaag
aaagcacagcatgaacgtacaaagtcactgtcattattcaaggagggaacttgtccattg
atggttgctactgacgttgctgctcgaggattggatattccagatgttgaagtagttatt
aactattctttccctttaaccacggaggattatgttcacagaattggtaggactggccgg
gccggtaagaagggtgtctctcacacattcttcacaaatcataataaggcacttgctggg
gagctggtgaatgttctcagagaagctagacaagttgtgccagatgctcttctgaaattt
ggcactcatgtaaagaagaaggagtccaagctgtatggagctcacttcagagaaatttcg
gctgatgctcccaaggctaaaaaaataacatttaacaactctgatgatgaagactga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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