KEGG   Columba livia (rock pigeon): 102087964
Entry
102087964         CDS       T02912                                 
Name
(RefSeq) C->U-editing enzyme APOBEC-1
  KO
K16932  C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
Organism
clv  Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:clv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clv03019]
    102087964
Enzymes [BR:clv01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.36  mRNA(cytosine6666) deaminase
     102087964
Messenger RNA biogenesis [BR:clv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    APOBEC1-ACF complex
     102087964
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102087964
SSDB
Motif
Pfam: APOBEC1 APOBEC4_like SNAD4 NAD1 APOBEC4 APOBEC_N APOBEC2 NAD2 APOBEC_C APOBEC3
Other DBs
NCBI-GeneID: 102087964
NCBI-ProteinID: XP_021153299
Position
Unknown
AA seq 122 aa
MPSVSCSITWVLSTTPCGKCSIKIMEFLKLHPNVTLEIYAAKLFKHLDIRNREGLRNLAK
NGVIIHIMNLADYSYWWKIFVTRQHGEEDYLPWSFALHIFLNCIEFQQILLGLPPLLPNF
KY
NT seq 369 nt   +upstreamnt  +downstreamnt
atgccatcagtttcttgctccatcacctgggtcttatctactactccctgtgggaaatgc
tccataaaaattatggagttcctgaagttacatcccaatgtgaccttggaaatatatgca
gccaagctcttcaagcacctggatatccgtaaccgggaaggtctcaggaacttggcaaag
aatggagtcattatacacattatgaaccttgcagattacagttactggtggaaaatattt
gtcacacgccaacatggagaagaggattatttgccctggagcttcgctttacacatcttt
ctgaattgcatagagttccaacagatccttttggggcttcctccattgctgccaaacttc
aaatactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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