KEGG   Coniophora puteana: CONPUDRAFT_65143
Entry
CONPUDRAFT_65143  CDS       T03134                                 
Name
(RefSeq) antiviral helicase
  KO
K12598  ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
Organism
cput  Coniophora puteana
Pathway
cput03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cput00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CONPUDRAFT_65143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cput03019]
    CONPUDRAFT_65143
   03041 Spliceosome [BR:cput03041]
    CONPUDRAFT_65143
   03009 Ribosome biogenesis [BR:cput03009]
    CONPUDRAFT_65143
   03016 Transfer RNA biogenesis [BR:cput03016]
    CONPUDRAFT_65143
Enzymes [BR:cput01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CONPUDRAFT_65143
Messenger RNA biogenesis [BR:cput03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     CONPUDRAFT_65143
Spliceosome [BR:cput03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    CONPUDRAFT_65143
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    CONPUDRAFT_65143
Ribosome biogenesis [BR:cput03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    CONPUDRAFT_65143
Transfer RNA biogenesis [BR:cput03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    CONPUDRAFT_65143
SSDB
Motif
Pfam: MTR4_beta-barrel DSHCT DEAD MTR4-like_stalk Helicase_C ResIII nSTAND3
Other DBs
NCBI-GeneID: 19208406
NCBI-ProteinID: XP_007773768
JGI: Conpu1_65143
UniProt: A0A5M3MAQ0
Position
Unknown
AA seq 1041 aa
MDAINSAVQNGNDEHPTKKRKLSDAADDLDLDLDEDAKIAKLARASPAPVVVDEFETEAK
REVAASAGLTGAVEEGSRLELRHQVRHQVAVPPAYSYIPISQHVPPAKPARTYKFTLDPF
QQVSVHAIQRNESVLVSAHTSAGKTVVAEYAIAQCLDNKQRVIYTSPIKALSNQKYRELL
ADFGDVGLMTGDVTINPSASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKERG
VVWEETIILLPHSVRYVFLSATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLFPA
GGEGIYLVVNEKGEFREDNFTKAMGLLQDKMGEDPADPKSGKNRKGKTKKGGDKKGPSDI
SKIIKMIMLKNYNPVIVFAFSKRECEALALTMVKFEFNTADEQELVANIFTNAIENLSPA
DRQLAQIENLLPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAK
TVVFTAARKFDGQEFRNLASGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPAAAKEMIKG
EANRLDSAFHLGYNMVLNLMKVEGISPEYMLERCFFQFQSSAGIPLLQGDLEAEERKLSE
MVVPDEKQVAEYYEYRQKLESMGEDFRTVITHPSYSLPFLQPGRLVKVKYKKLDFGWGVI
VNYQKRTHPKGEVSLEPIPPHEQYVVDVLLNCAPASSIPKDRNVTTATPAGVQPCPPGEK
GTPLVVPILLSTIHGISHIRLFLPKDLRPEAARETVWKSVGEVQRRFPDGIALLDPIQNM
DIKDDKFKELVKRIESTERQMFASPLHKDPRLPELYSLYSTKEETRARVRALKSKISETY
DVLQLHELKCRKRVLRKLGFTSADDIVDMKGRVACEISTGDELLLTELIFNGAFNSLLPE
QCASLLSCFVFTEKSEKQTKLGEELAAPLRVMQELARRIAKVAKESNLPIQEDEYVSSFK
VELMDSVMQWCRGASFADICKLTDQFEGNLIRVFRRLGELLRQMAQAAKVIGNAELEDKF
NQASEMLERPNSVIFCSSLYL
NT seq 3126 nt   +upstreamnt  +downstreamnt
atggacgcgatcaacagcgctgtccagaacggcaacgacgagcacccgaccaagaagcgc
aagctctccgacgccgcagacgatctcgacctcgacctcgacgaggacgccaaaatcgcc
aagctcgcgcgcgcgtcgcccgcacccgtcgtcgtcgacgagtttgaaaccgaggcaaag
cgcgaagtcgccgctagcgcagggctcacgggcgccgtcgaggagggatcaagactcgag
cttcggcatcaggtccgacaccaggtcgcagtgcctcccgcctacagctacatcccaata
tcccagcacgttcccccagccaaaccggcgcggacgtacaagttcacgcttgatccattc
cagcaggtctccgtccatgccatacaacgaaacgagtctgtccttgtgtctgcacacacc
agtgccggcaagaccgttgtcgcagaatatgccattgcacaatgtctcgacaacaagcag
cgggtgatttacacaagtcccatcaaggccctcagtaatcaaaagtatcgcgaacttctt
gcagactttggagacgtcggacttatgaccggagatgttaccatcaacccttccgcttca
tgtctagtcatgaccaccgagattctgcgctcaatgctctatcgtggctccgaagtcatg
cgcgaagtcgcatgggtcatcttcgacgagatccactacatgcgcgacaaggagcgtggc
gtcgtctgggaagaaaccatcatcctcctaccccattctgttcgctacgttttcctctcc
gcgacgatccccaacgcgatgcagttcgccgagtggatatgcaagtcgcacgagcaaccc
tgtcacgtcgtctacaccgacttccgccccacgcccctccagcactacctcttccccgcc
ggcggagagggcatatatctcgtcgtgaacgagaagggcgagttccgcgaggataacttc
acaaaagctatgggtttactgcaggacaagatgggcgaggatcctgccgacccgaagagc
ggcaagaatcgcaagggcaagacaaagaagggcggcgacaagaagggtccatccgacatt
agcaaaatcatcaagatgatcatgctcaaaaactacaaccccgtcatcgtctttgcattt
agtaaacgcgaatgcgaagccctcgcgcttaccatggtcaagttcgaattcaacaccgcc
gacgaacaagaactcgtcgccaacatcttcaccaacgccatcgagaacctttcccccgcc
gaccgccagctcgcccagatcgagaacctcctcccgctgctcaagcgcggcatcggcatc
caccacggcggcctcctgcccatcctcaaagaagtcatcgagatcctcttccaagagggc
ctcatcaaggtcctcttcgctaccgagacgttctccatcggcctcaacatgcccgccaag
accgtcgtcttcaccgccgcgcgcaagttcgacgggcaagagttccgcaacctcgcctcg
ggcgagtacatccagatgtccggccgcgcgggccgccgcgggctcgacgaccgcggcgtc
gtcatcatgatgtgcgatgagaagctcgaaccggccgcggccaaggagatgatcaagggc
gaggcgaaccgactcgactcggcgttccatcttgggtataatatggtgctgaacctgatg
aaggtggagggtatcagtccggagtatatgctcgagcgttgtttcttccagttccagagt
agcgcgggtattccactattacagggcgacctggaggcggaggaaaggaagctgagcgag
atggtcgtgcccgacgaaaagcaggttgcggagtactacgaataccgtcagaaactcgag
tcaatgggcgaggatttccggacagtcattacgcaccccagctacagccttcctttccta
caaccagggcggttagtgaaggtaaaatacaaaaaacttgactttggttggggcgtcatt
gtcaactaccagaagcggacacacccaaagggcgaagtgtcgctcgagcccatacctccc
cacgaacaatacgttgtcgacgtcctcctcaactgcgcccccgcctcctccatccccaaa
gaccgcaacgtaacgacagcgacccctgccggcgtccagccatgtccgccgggcgaaaaa
ggcacccctcttgtcgtccctatattactctccaccatccacggcatcagccacattcgc
ctgtttctcccaaaagacctccggccggaggcagctcgcgagacggtgtggaagagtgtg
ggggaggtgcagcggcggttcccagatgggatagccctactcgaccctatacagaatatg
gacattaaagatgacaagttcaaggaactcgtcaagcgcatcgaatccaccgagcgtcaa
atgttcgcttctcccttgcacaaggatcctcgcctgcccgagctctacagcttgtactcc
acaaaggaagagacccgcgcgcgggtacgcgcgctcaagtcgaagatctcggagacgtac
gacgtcctccagctgcacgagctcaagtgccgcaagcgcgtgctccgcaaactcggcttc
acgtccgcggacgacattgtcgacatgaagggccgcgtcgcgtgcgagatcagcaccggc
gacgagctcctcctcaccgagctcatcttcaacggcgcgttcaactcgctcctgcccgag
cagtgcgcgagtctgctcagctgtttcgtgtttacggagaagagcgagaagcagacaaag
ttgggcgaggagctggctgcgccactgcgagtcatgcaggagctcgcgcgccgcatcgca
aaagtcgccaaagagtccaacctgcccatccaggaggacgagtacgtgtcctcgttcaag
gtcgagctcatggactccgtcatgcagtggtgccgtggcgcctctttcgccgacatatgc
aagctcacggatcagttcgagggcaaccttatccgcgtcttccgccggctcggcgagctc
ctgcgccagatggcgcaggcggcgaaagtgatcggaaacgcggagctcgaggacaagttc
aaccaggcgtcagaaatgctcgagcggcccaattccgtcatcttctgctcatcgttgtac
ctgtag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

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