KEGG T02552: SOTONF3

Chlamydia trachomatis F/SotonF3: SOTONF3_00349

Entry

SOTONF3_00349     CDS       T02552

Name

(GenBank) excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

ctrf Chlamydia trachomatis F/SotonF3

Pathway

ctrf03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:ctrf00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SOTONF3_00349
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctrf03400]
    SOTONF3_00349
DNA repair and recombination proteins [BR:ctrf03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SOTONF3_00349
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SOTONF3_00349

SSDB

Motif

Pfam:

ABC_tran SMC_N AAA_29 UvrA_inter UvrA_DNA-bind AAA_16 RsgA_GTPase nSTAND1 AAA_23 DnaJ_CXXCXGXG Anti-TRAP Viral_helicase1 AAA_33 cobW NACHT AAA_21

Other DBs

NCBI-ProteinID:

CCP57008

Position

376462..381822

AA seq 1786 aa
MSSIVRLSGITVRNLKNITVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYLATLPS
FFTTKLDSLPDPSVKKIEGLSPTVAVKQNFFEQHIHATVGSTTEINSYLALLFSLEGQAY
DPVTLHPLTLYSKEKILSEIAAIPDGTQLTLLAPLPARDVLTVRECLRQGFTKVLIDEEV
VPIHKFLTTGIPVPGQLIVDTLIKNTSNTPRLKVSLFTTLDIGHGECSLHFDNQKRVFST
QATLPETQQTYAPLSPDLFSSHSHKDRCPQCQGSGIFISIDDPCIIQQTLSIEDNCCPFA
GNCSTFLYRTIYQSLADSLGFSLSTPWQNLSPEIQHIFLYGKEGLSIPVKLFDGTLGKKT
QTHKQWKGVLNEIGEKIRFSNKPARYLPKGTSYTVCPRCNKTGLSDYANATRWHGKSFAD
FQQMSLQELFIFLNQLPEKELAIEEVIQGFKSRLAILIDLGLPYLSPERAIDTLSGGERE
RTALAKHLGAELIGVMYILDEPSIGLHPQDTHKLMNVIRRLRDQGNTVLLVEHDEQMISL
ADRVIDIGPGAGIFGGEVVFNGSPREFLAKSDSLTAQYLRQEQHISVPAKRTNSLGTITL
SKANKHNLKDLTVSIPLGQMTVVTGVSGSGKSSLINDTLIPCVEEFIEQGFCSTLSIQGA
LSRLVHINRDLPGRSQRSIPLTYIKAFDEVRQLFAEQPRCKTLGLTKSHFSFNTPLGACA
ECGGLGSITTTDNRDSITCPSCLGKRFLPQVLEVRYKNKTIADILEMTAYEAKNFFLDEP
SIHQKIETLCTLGLQYLPLGRPLYSLSGGEIQRLKLAYELLAPVKHPTLYVLDEPTTGLH
THDVKQLIYVVQSLIHQGHSVIIIEHNMHVVKVADYILELGPEGGNKGGYLIASCSPEEL
IHKHTPTAIALRPFLSSPQELPYLPDPSPKPPVPAAITIANAHQHNLKHIDLSIPRYALT
AVTGPSASGKHSLVFDILHAAGNIAYAELFPPYIRQALIKKTPLPAVDKVTGLSPVIAIE
KTSASRNSNHSVASALEISEMLESLFTRIGHPYSPISGDALRTISPKTIAEELLTHYTKG
YVTITVPFPKEEEFFSYTQEMLQEGFLKLYANEQFYDLDGPFPTSLENPALVIHHVKILE
KNLPSLLASLTLAFSKASSVCLHIEYAGTSLSKTYRQGLQDASGNLFPNIETPSILNHES
YLCPLCHGKGFLSTCSILPHKKRFAQHTPISLFTSLFPNQDPSPIYPLLNELGIPSIALF
QEIDVLSFESLCLGTQQHLGLNALCTKAMLMESEEDFPPDLISKTPCNQCQGLGVYTYKH
CTRIHSISLSEIYQSNVAFLKKLLLSVEEEPSLVQDILSRLDLLDRVGLGYVILGQEQQS
LSDGEHYRLLLAKAFSSGLTDVIYLLEDPLAGIHPEDALCLLAVIKKLVTNHNTVIVTDR
EGSLAEHADYLLHLGPEPGPNGGYLLSTSALKQSQPVLCNTRSSEKTPQLSVSVSTSTIQ
IENLAFPLQRLSTISGVSGSGKTTLLNSIYEHGCAILEKDPSVFSEIIFLDSYPQIASSR
SDISTYFDIAPSLRNFYASLTQAKALNISVSMFSPNTKQGQCSDCWGLGYQWIDRAFYAM
EKRPCPTCGGFRVQPLIQEVVYEGKHFGQLLQASLNEVAETFSFLKKIQKPLHTLITNGL
GYLSLGQNMASLSLSEKIAIKLTKHLFLPPKHPTLFLLDGIATSLDNQQQSALLVQLNTL
VSLGHTVVIIENHPAFSQQADFWIQMGRKTDNHILFAGPNPNLSFT

NT seq 5361 nt +upstreamnt +downstreamnt
atgtcttctatcgttagactttctggtattactgtaaggaatttaaaaaacattacagta
gagttttgtcctcgagagatcgttttgttcaccggggtttctggatccggaaagtcttct
cttgctttcaatactatttatgccgcaggaagaaaacgctaccttgctaccctcccctct
ttctttacaacaaagctagactccttaccagatccctccgtaaaaaagatagaaggattg
tctccaaccgtagccgttaagcaaaactttttcgaacaacacatacatgcgacagtcggt
agtacaaccgaaattaactcgtatttagccctacttttctccttagagggccaagcctat
gatccggttacactacaccctctaactctatacagtaaggaaaaaatcctttctgaaata
gctgccattccagatggaactcaactgactttgctcgctcctcttcccgccagggatgtt
cttaccgttcgagaatgtctccgtcaagggtttaccaaagtcctcattgatgaagaggtt
gttcctattcataagtttcttacaacaggcattcctgttcccggtcaactcattgtcgat
acgttgatcaaaaatacctctaacactccgcggttaaaagtcagcttgtttacaacctta
gacatcggtcatggtgaatgctccttacacttcgataatcagaaacgagtcttttccaca
caggcgactcttccagaaacacaacaaacctatgcgccgctatccccagatcttttttcg
tcgcacagtcacaaagatcgttgtccacaatgccaaggttcaggaatctttatatccatc
gatgatccctgtatcatccagcaaacgctctccatcgaagacaactgctgtccttttgca
gggaattgctccaccttcttatatagaaccatctatcaatctctagctgatagcctagga
tttagtctcagcactccgtggcaaaatctttctcctgaaatccaacatatttttttatat
gggaaagaaggtctctctatcccagtaaagctgtttgatggaactttaggtaagaaaacc
cagacacataagcaatggaaaggtgtgctcaatgaaattggagaaaaaattcgattttca
aataagcctgctcgctaccttcctaaagggacttcctatacagtatgccccagatgtaac
aagactggactcagcgactatgctaatgctacccgatggcatgggaaaagctttgcagac
tttcaacaaatgtctcttcaagagttatttattttcctgaatcaacttcctgagaaagag
ctcgctattgaggaagtaatccaaggattcaaatcgcgacttgctattctgatagatctt
ggtcttccctacctttctccagaaagagctattgatactctttccgggggagaacgggaa
cgtacggccttagctaagcatctaggtgccgaactcatcggagtcatgtatatcctggat
gagccttctattgggctacatcctcaggatacccataagcttatgaatgttattcgaaga
ctccgtgatcagggaaacactgtcttactcgttgaacatgatgagcagatgatttctctc
gcagaccgggtcattgatatcggcccaggagctggtatttttggtggcgaagttgtcttc
aatggatctcctagagaatttctggcaaagagtgactctttgaccgcacaatatctccgt
caagagcaacatatttcggtccctgctaaacgtacaaactccttagggacaattacctta
tctaaagccaataagcataatcttaaggacctgacagtttcaattccattaggacaaatg
actgtcgtcaccggagtctctggttctgggaaatcttctcttatcaacgatacactaatc
ccttgtgtggaagagtttattgaacagggattctgttccactctatctattcaaggagcc
ctctctcgccttgtccatattaatagagatcttccaggacgctcacaacgatctatccct
ttgacctatatcaaagcttttgacgaggttcgtcagttattcgcagaacaacctcgctgt
aaaaccttaggactcactaaaagccactttagcttcaacacgcctctaggagcctgtgca
gaatgtggaggcctaggatctataacaacgactgataaccgcgattccataacctgtcct
tcctgtttagggaaacgattcctccctcaagtattagaagtccgctataaaaataaaacg
attgccgacattcttgaaatgacggcctatgaagctaaaaacttctttttagatgagcct
agtattcatcaaaaaatcgaaaccttatgcactctgggactacaatacctgcctctagga
agacctctctatagcttatctggaggagaaatccagagactcaagcttgcatatgagtta
ttggctccagttaaacaccctactctctatgttcttgatgaacccacaacaggcctccac
acccacgatgtcaaacaacttatttatgttgtgcaatcccttattcatcaagggcactcg
gtgatcatcatcgagcataacatgcatgtggtgaaagttgcagactatatactggaactt
ggtcctgaaggaggaaataaaggcggttatctcatagcttcttgctctccagaagagcta
atccataaacatactccaacagctatagctctccgtcctttcctatcttctcctcaagaa
ctcccttatctacctgatccgagtcccaaacctcctgtacccgccgccattactattgca
aacgctcaccagcataatttaaaacatatcgatctctccatacctcgatatgcgcttact
gctgtgacaggtccatccgcttccgggaaacattcccttgtatttgatattctgcatgca
gcaggaaacatcgcttacgcagagctattccctccctatatccgacaagctctcataaaa
aaaactcctcttcctgctgttgataaagtaacaggactatcccctgttatcgcgatagaa
aaaacgagcgcctcgagaaattccaatcattctgtggcttctgcattagaaatctcagaa
atgctagaaagccttttcacacgaatcggccatccttattctccgatttctggtgatgca
ctaagaactatttctcctaaaacgattgctgaagaattgctcacgcattacacgaaaggc
tatgtaacgattactgttcctttccctaaagaggaagagtttttctcttatacgcaagag
atgcttcaggaagggtttttaaaactttatgctaatgaacagttctatgatttagatggg
cctttccctacttctttagagaacccagctctagtcatccaccatgtcaaaattttagaa
aaaaatctgccttctcttttggcttctcttactttagcctttagtaaagcttcttctgtc
tgtctgcatatcgaatatgctggaacaagcttatctaaaacataccgccaaggattacaa
gatgcttctgggaacctattccctaatatagaaacaccctctatcttgaaccatgagagc
tacttatgccctctctgtcatggaaaaggcttcttatccacttgttctattcttcctcat
aagaaacgtttcgcacagcataccccaatttccttattcacaagcctatttcctaaccag
gatccttcaccgatctatcctcttctgaatgaactagggatcccttccattgctctattc
caagaaatagatgttctttcttttgaatctctttgcctaggaacacaacaacatctggga
ttgaatgctctttgcacaaaagcaatgttaatggaatccgaagaagatttccctcccgac
cttatctccaaaactccgtgtaaccaatgtcagggtcttggcgtatacacctacaagcat
tgcacccgtattcacagcatttccctatcagaaatttaccaatccaatgttgcttttctt
aaaaagctcttactttctgtagaagaggaaccctctcttgttcaagatatccttagtaga
ttggaccttctagatcgagttgggttaggctatgttatcctcggacaagaacaacagtct
ttgagtgacggagagcattataggcttctattggcaaaagctttttcatcaggtctcact
gatgttatctatcttttagaagatcccttagcagggattcacccggaagatgctctttgt
ttgcttgctgttattaaaaaactcgtgaccaaccataatacagtaatagtgacggataga
gaaggctctcttgcggaacatgctgattacctgcttcacctgggtcctgaacctggtcct
aacggaggctatctcttatcaaccagcgctcttaaacaatctcaaccggtactttgcaac
acacgctcttccgaaaaaacaccacaactttctgtctcagtatccacttctacgatccaa
attgagaaccttgctttccctttacaacgactctcgactatttctggtgtatcaggatct
ggcaaaacaaccttactaaatagcatttacgaacatggctgcgctattcttgaaaaggat
ccttctgtattctcagaaattatttttctagattcctatccccaaattgcatcttctcga
tccgatatcagcacttattttgatatcgctccttcattaagaaatttctacgcttctctg
actcaagcaaaagctttaaacatctcagtttctatgtttagtccaaataccaaacaaggg
caatgttcggattgttggggactaggatatcaatggatagatcgagccttttatgctatg
gaaaaacgtccttgtccaacatgtggaggattccgtgtacaaccactcatacaagaagtt
gtgtatgaagggaaacatttcggccagttattacaagcctctttaaatgaagtagctgaa
actttttctttcttaaaaaaaatccagaaacctttacacaccttaattacaaatggtctt
ggctacttatcattgggacaaaatatggcctctctatctctaagtgaaaaaattgccata
aaattaactaaacatctattccttcctcctaaacatcctactttattcttactagatggg
atagctacctctcttgacaatcaacaacaatccgctctgctcgtccaactcaacaccttg
gtgtctttaggacatacagtagtgatcatagaaaaccaccccgccttctctcagcaagct
gatttttggatacaaatgggacgtaaaacagataatcacattctctttgcaggacctaat
cccaatctatctttcacttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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