KEGG   Clostridium tyrobutyricum: CTK_C18120
Entry
CTK_C18120        CDS       T04331                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ctyk  Clostridium tyrobutyricum
Pathway
ctyk02024  Quorum sensing
ctyk03060  Protein export
ctyk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ctyk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CTK_C18120 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CTK_C18120 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CTK_C18120 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ctyk02044]
    CTK_C18120 (ffh)
Enzymes [BR:ctyk01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CTK_C18120 (ffh)
Secretion system [BR:ctyk02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CTK_C18120 (ffh)
  Eukaryotic Sec-SRP protein
   CTK_C18120 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA cobW SRPRB AAA_31 Roc AAA_17 ResIII PduV-EutP Arf MMR_HSR1 NTPase_1 AAA_30 AAA_24 nSTAND3 ATPase Zeta_toxin ArsA_ATPase AAA_18 AAA_14 APS_kinase ATP_bind_1 AAA_33 AAA_16 YqeC MraZ Glycos_trans_3N DUF6331
Other DBs
NCBI-ProteinID: AND85067
Position
complement(1807573..1808928)
AA seq 451 aa
MAFEGLASKLQETLKKLRGKGKLSEKDIKDAMREVKLALLEADVNYKVVRDFIKSVSEKC
FGEAVLKSLTPAQQVIKIVNEELTALMGKSESSIEYSKNGLTIIMLVGLQGAGKTTMCGK
LALELRKKNKKPLLVACDIYRPAAIKQLQVVGKQIDIPVFSMGDRVTAADISKGAVEYAK
NNNLNVVIIDTAGRLQIDEKLMNELKDVKQVVNPNEIMLVVDSMTGQDAVNVAKSFNEQI
DITGVILTKLDGDTRGGAALSIRAMTGKPIKFIGLGEKMNDFQVFHPDRMASRILGMGDV
LSLIEKAQQSIDQDEAKQLGERMLNKEFNFQDFLDVMQQAKKLGPISKLVEMIPGVDSKI
LKGVDLSQGEKDLKIKEAIIKSMTQKERLSPVIISSSSSRKKRIASGSGTTIQQVNRLLK
DFDKTKKMMKQFNGIKNGKGFGKNLFGKMPF
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcttttgaaggattggcatctaagcttcaggaaactttaaaaaagcttagaggaaaa
ggtaagctttcggaaaaagatataaaagatgcaatgagagaagtaaaattggcacttttg
gaagcagatgttaactataaagttgtacgtgattttataaaaagtgtaagtgaaaaatgt
tttggagaagcagtacttaagagtttaactccagcacagcaagtcataaagatagtaaat
gaagagctaactgctttaatgggaaaaagtgaaagttctattgagtattcaaaaaatgga
ttaaccataataatgcttgtaggacttcaaggtgcaggaaagacaacaatgtgtggaaaa
ttggcacttgaacttagaaaaaagaataaaaaaccacttttagtagcatgtgatatatat
agaccggctgctataaaacagttacaggtagtaggaaagcagatagatattcccgtattt
tccatgggagatagagttacagcagcggatatatcaaaaggagctgttgaatatgcaaaa
aataataacttaaatgtggtaataatagatactgcaggcagacttcaaatagatgaaaaa
cttatgaatgaacttaaagatgtaaaacaagtagtaaacccaaatgagattatgttagtt
gttgattcaatgacaggtcaggatgctgttaatgtagcaaagagtttcaatgaacaaatc
gacattacaggggtcatactgacaaaactcgatggagatactagaggaggggcagctctt
tctataagggccatgacaggaaaacctataaaatttataggcctgggagaaaaaatgaat
gattttcaggtatttcatccagacagaatggcctctagaatattgggtatgggtgatgta
ctgtcacttatagaaaaagcccagcaatccatagatcaggatgaagcaaaacaactcgga
gagagaatgttaaacaaggaatttaacttccaagattttttggatgttatgcagcaggct
aaaaagcttgggcctattagtaaacttgtagagatgattccaggagttgattcaaaaatt
ttaaaaggtgtagatctttctcaaggagaaaaggatttgaaaataaaggaagctattata
aaatccatgactcaaaaagagagattgagtcctgtaattataagcagttcttcttcaaga
aaaaaaagaatagcttctggttcaggaactacaatacaacaggttaatagacttcttaaa
gactttgacaagactaaaaaaatgatgaagcaatttaatggtattaagaatggaaaaggt
tttggcaaaaatttatttgggaaaatgccattttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (31)   
   Pfam (31)   
All databases (42)   

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